Oceanihabitans sp. IOP_32: FEZ18_01205
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Entry
FEZ18_01205 CDS
T06249
Symbol
sbcD
Name
(GenBank) exonuclease subunit SbcD
KO
K03547
DNA repair protein SbcD/Mre11
Organism
oci
Oceanihabitans sp. IOP_32
Brite
KEGG Orthology (KO) [BR:
oci00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
oci03400
]
FEZ18_01205 (sbcD)
DNA repair and recombination proteins [BR:
oci03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
FEZ18_01205 (sbcD)
Archaeal homologous recombinant proteins
FEZ18_01205 (sbcD)
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Gene cluster
GFIT
Motif
Pfam:
Metallophos
SbcD_C
Motif
Other DBs
NCBI-ProteinID:
QFZ53521
UniProt:
A0A5Q0JS87
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Position
complement(303094..304296)
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AA seq
400 aa
AA seq
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MKILHTADWHLGHRLHEQSQLEEQTLFLSWIENYIIDQKIDVLLISGDVFDSGSPSNQSL
EMYYNFLVKLNTTTCKSIIITGGNHDSPGTLNAPKHILNALSIKVVGKATEQVKDEVFEI
DINGEKVIVAAVPYLRDGDIRRAVAGESFEVLTDRYKTALINHYQAVASHCKSINTAQAP
VIAMGHLFAIGGSVSDSEQNIYVGTLGHIGAEDFPEYFDYIALGHLHRPQIIGGNEKIRY
SGSPHILSFSEIGYDKKVIVLTIENNKIVKIQDEIVPRFRAFYKLKGAVLECIDVFPSIV
SNAYNLTPWVEIVLHEDHTINTDDLKKEAEKYGFEILKTTLKNHRKTKGIEELLEETKSI
KELKPTEVFKLKCAEMNFDLAEAPEVLDAFNDILQTVKKQ
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatacttcacacggccgattggcatttgggacacagactacacgagcaatctcaa
ttagaggaacaaaccttgtttttaagctggattgaaaactacatcatcgatcaaaagatt
gatgtgcttttaatctctggagatgtttttgattcgggttcaccatcaaatcaaagttta
gaaatgtactacaatttcttggttaaactaaatacaacaacttgtaaatcgattattatt
acaggtggcaaccacgattcgccgggcacattaaacgcaccaaaacatattttaaatgcg
ctatccataaaagttgttggcaaagccacagagcaggttaaagatgaggtttttgaaatc
gatataaacggcgaaaaagtaattgttgcagccgtgccatatttgcgtgatggtgatatt
agacgtgccgttgctggtgaatcttttgaagttttaaccgatagatacaaaacagcatta
ataaaccattatcaagccgtggcttcccattgtaaatctataaatactgcacaggcacca
gtaattgccatgggtcatttatttgccattgggggatctgtttcagacagtgaacaaaat
atttatgtaggaactttagggcatatcggagctgaagatttcccagaatatttcgattat
atcgctttagggcatttgcaccgacctcaaataattggcggaaacgagaaaattagatat
tcgggatcgccacatattttaagctttagtgaaattggttatgataaaaaagtgattgtt
ttaactatagaaaacaacaaaatcgttaagatacaagatgagattgttccacgttttagg
gctttttataagttaaaaggtgcagttttagaatgtattgatgtttttccaagtatagtc
tctaacgcttataatttaactccttgggtggaaattgtgttgcacgaagatcatactatt
aataccgatgatttaaaaaaagaggccgaaaaatacgggtttgaaatattaaaaacgacc
cttaaaaaccaccgcaaaacaaaaggtattgaagaattacttgaagagacaaaatcaatt
aaagaattaaaacctaccgaagtttttaagcttaaatgtgcagaaatgaattttgattta
gcagaagcccccgaggttttagatgcttttaatgacatattgcaaactgttaaaaagcaa
taa
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