KEGG   Oceanihabitans sp. IOP_32: FEZ18_01985
Entry
FEZ18_01985       CDS       T06249                                 
Name
(GenBank) HU family DNA-binding protein
  KO
K03530  DNA-binding protein HU-beta
Organism
oci  Oceanihabitans sp. IOP_32
Brite
KEGG Orthology (KO) [BR:oci00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:oci03032]
    FEZ18_01985
   03036 Chromosome and associated proteins [BR:oci03036]
    FEZ18_01985
   03400 DNA repair and recombination proteins [BR:oci03400]
    FEZ18_01985
DNA replication proteins [BR:oci03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    FEZ18_01985
Chromosome and associated proteins [BR:oci03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    FEZ18_01985
DNA repair and recombination proteins [BR:oci03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      FEZ18_01985
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG HU-DNA_bdg HU-CCDC81_bac_2 2-Hacid_dh
Other DBs
NCBI-ProteinID: QFZ53657
UniProt: A0A5Q0JS40
LinkDB
Position
488955..489227
AA seq 90 aa
MNKTDLIDAMAEHAGITKAAAKKALECALIEIEGALQKGNRVSLVGFGSWSVSKRAAREG
RNPQTGETIKIKAKNVVKFKPGSDLTNAVN
NT seq 273 nt   +upstreamnt  +downstreamnt
atgaacaaaacagatttaatcgatgccatggcagagcatgcaggaattacaaaagctgct
gcaaaaaaagctttagaatgtgcacttattgaaattgaaggagctttgcaaaaaggcaat
agagtttctttagtaggtttcggatcttggtcagtttctaaaagagctgctagagaagga
agaaatcctcaaactggtgaaaccattaaaataaaagccaaaaacgttgttaagtttaaa
cctggatcagatttaactaatgccgtaaactaa

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