Oceanihabitans sp. IOP_32: FEZ18_04815
Help
Entry
FEZ18_04815 CDS
T06249
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
oci
Oceanihabitans sp. IOP_32
Brite
KEGG Orthology (KO) [BR:
oci00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
oci03016
]
FEZ18_04815 (truB)
Enzymes [BR:
oci01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
FEZ18_04815 (truB)
Transfer RNA biogenesis [BR:
oci03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
FEZ18_04815 (truB)
Prokaryotic type
FEZ18_04815 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
SAM_PNT
DUF3206
Motif
Other DBs
NCBI-ProteinID:
QFZ54176
UniProt:
A0A5Q0JTX3
LinkDB
All DBs
Position
1153716..1154408
Genome browser
AA seq
230 aa
AA seq
DB search
MNSKEAYLSGQILLIDKPLNWTSFQVVNKLRWELRQAFDIKKIKVGHAGTLDPLATGLLV
ICTGKMTKQIDTFQGQIKEYTGTFVLGSTTPSFDLETEINDTFETKHISKSLILNTTKQF
IGDIQQFPPVFSALKKDGKRLYEYARAGESVEIKSRTVNIQAFEITRIDGLEVDFRVVCS
KGTYIRTLANDFGKALQSGAHLSALRRTKIGDFNVADAVSIETFIASLKG
NT seq
693 nt
NT seq
+upstream
nt +downstream
nt
atgaattcgaaagaagcctatctttctggccagattttacttatcgataagcctttaaac
tggacctcgtttcaggtggtaaacaaacttcgttgggagctacgccaagcgttcgatata
aaaaaaattaaagttggtcatgccggcacactagatccgctagctacaggcttgttagta
atttgcacgggtaaaatgaccaagcaaatcgacacctttcagggacaaataaaagaatat
accggtacttttgttttgggaagcaccaccccttctttcgatttggaaactgaaattaac
gacaccttcgaaaccaaacatatttcgaagagcttgattctaaatacaaccaaacaattt
attggagacatacagcaatttcctcctgttttttcagcattaaaaaaagacggaaaacgc
ttatacgagtatgctagagctggtgagtcggtagagataaaatcgagaacggtaaatatt
caagccttcgaaattacaagaattgatggcttagaagtagattttagagtcgtttgcagc
aaaggcacgtacattcgaactttagcaaacgactttggaaaggcgctgcagtctggagcg
catctatctgctttaagacgtacaaaaattggagattttaatgtagccgatgccgtttca
atagaaactttcatagcatcattaaaaggctaa
DBGET
integrated database retrieval system
