Oceanihabitans sp. IOP_32: FEZ18_05250
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Entry
FEZ18_05250 CDS
T06249
Symbol
ruvB
Name
(GenBank) Holliday junction branch migration DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
oci
Oceanihabitans sp. IOP_32
Pathway
oci03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
oci00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
FEZ18_05250 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
oci03400
]
FEZ18_05250 (ruvB)
Enzymes [BR:
oci01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FEZ18_05250 (ruvB)
DNA repair and recombination proteins [BR:
oci03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
FEZ18_05250 (ruvB)
RecFOR pathway proteins
FEZ18_05250 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
AAA_22
Mg_chelatase
AAA_3
nSTAND3
AAA_14
Rad17
AAA_16
RNA_helicase
NB-ARC
AAA_33
AAA_PrkA
TsaE
NTPase_1
AAA_18
AAA_24
ABC_tran
NACHT
AAA_28
NPHP3_N
Torsin
AAA_17
bpMoxR
AAA_11
IstB_IS21
Motif
Other DBs
NCBI-ProteinID:
QFZ54239
UniProt:
A0A5Q0JTS4
LinkDB
All DBs
Position
complement(1252771..1253793)
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AA seq
340 aa
AA seq
DB search
MNENLDPTDENFSPEELDVEKKLRPLAFDDFTGQDQVLENLKIFVQAANLRTEALDHTLF
HGPPGLGKTTLAHILANELSVGIKVTSGPVLDKPGDLAGLLTNLEERDVLFIDEIHRLSP
IVEEYLYSAMEDYKIDIMIESGPNARTVQINLNPFTLIGATTRSGLLTSPMRARFGIQSR
LQYYKTDLLTTIVQRSATILEVPISMEAAIEIAGRSRGTPRIANALLRRVRDFAQIKGNG
KIDIKIAKYALEALSVDAYGLDEMDNKILSTIIDKFKGGPVGISTIATAVSESPETIEEV
YEPFLIQQGFIMRTPRGREVTEQAYKHLGKIKGATQGGLF
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgaatgaaaacctagatccaacagacgagaatttttcacctgaagaattagatgtagaa
aaaaaattaagacctttagcctttgatgattttacgggtcaagatcaagtattagaaaat
cttaaaatttttgttcaggccgcaaatttacgtaccgaagcattagaccatacgttgttt
catggtccaccaggcttgggtaaaaccacgttggcacatattttggcaaacgagcttagt
gtgggcattaaagtgacttctggacctgtgttagataaacccggagaccttgctggattg
cttacaaatctagaagaacgcgatgtgttgtttatagacgagattcatcgtttaagtcct
atagtagaagagtatttatactcggcaatggaagattataaaattgatattatgattgag
tctggtcccaatgccagaacggttcagataaatttaaatccttttaccttaattggagcc
acaacacgatcgggattattaacctcgcccatgcgtgcacgttttggtatacagagcaga
ctgcaatactacaaaaccgatttactaacaactatagtgcaacgaagtgccactatttta
gaggtgcccatctccatggaagccgccatagaaatagctggtagaagtcggggcacacct
agaattgcaaatgctttactgcgtcgggttcgcgacttcgctcaaattaaaggcaatggt
aaaatcgatataaaaatagcaaagtatgccttagaggctttaagtgttgatgcctatggt
ttagatgaaatggacaataagattttatcgaccataatcgataaatttaaaggcggtcct
gtgggtatctcgaccattgcaacggccgtaagtgagagtcccgaaactattgaagaggtt
tacgagcctttcttaatacaacaggggtttattatgcgtacaccacgcgggcgtgaagta
accgagcaagcgtataagcatttaggtaaaataaaaggtgcaacacagggcggtttattc
taa
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