KEGG   Oceanihabitans sp. IOP_32: FEZ18_05250
Entry
FEZ18_05250       CDS       T06249                                 
Symbol
ruvB
Name
(GenBank) Holliday junction branch migration DNA helicase RuvB
  KO
K03551  holliday junction DNA helicase RuvB [EC:5.6.2.4]
Organism
oci  Oceanihabitans sp. IOP_32
Pathway
oci03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:oci00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    FEZ18_05250 (ruvB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:oci03400]
    FEZ18_05250 (ruvB)
Enzymes [BR:oci01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     FEZ18_05250 (ruvB)
DNA repair and recombination proteins [BR:oci03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     FEZ18_05250 (ruvB)
    RecFOR pathway proteins
     FEZ18_05250 (ruvB)
SSDB
Motif
Pfam: RuvB_N AAA_lid_4 RuvB_C AAA AAA_5 AAA_22 Mg_chelatase AAA_3 nSTAND3 AAA_14 Rad17 AAA_16 RNA_helicase NB-ARC AAA_33 AAA_PrkA TsaE NTPase_1 AAA_18 AAA_24 ABC_tran NACHT AAA_28 NPHP3_N Torsin AAA_17 bpMoxR AAA_11 IstB_IS21
Other DBs
NCBI-ProteinID: QFZ54239
UniProt: A0A5Q0JTS4
LinkDB
Position
complement(1252771..1253793)
AA seq 340 aa
MNENLDPTDENFSPEELDVEKKLRPLAFDDFTGQDQVLENLKIFVQAANLRTEALDHTLF
HGPPGLGKTTLAHILANELSVGIKVTSGPVLDKPGDLAGLLTNLEERDVLFIDEIHRLSP
IVEEYLYSAMEDYKIDIMIESGPNARTVQINLNPFTLIGATTRSGLLTSPMRARFGIQSR
LQYYKTDLLTTIVQRSATILEVPISMEAAIEIAGRSRGTPRIANALLRRVRDFAQIKGNG
KIDIKIAKYALEALSVDAYGLDEMDNKILSTIIDKFKGGPVGISTIATAVSESPETIEEV
YEPFLIQQGFIMRTPRGREVTEQAYKHLGKIKGATQGGLF
NT seq 1023 nt   +upstreamnt  +downstreamnt
atgaatgaaaacctagatccaacagacgagaatttttcacctgaagaattagatgtagaa
aaaaaattaagacctttagcctttgatgattttacgggtcaagatcaagtattagaaaat
cttaaaatttttgttcaggccgcaaatttacgtaccgaagcattagaccatacgttgttt
catggtccaccaggcttgggtaaaaccacgttggcacatattttggcaaacgagcttagt
gtgggcattaaagtgacttctggacctgtgttagataaacccggagaccttgctggattg
cttacaaatctagaagaacgcgatgtgttgtttatagacgagattcatcgtttaagtcct
atagtagaagagtatttatactcggcaatggaagattataaaattgatattatgattgag
tctggtcccaatgccagaacggttcagataaatttaaatccttttaccttaattggagcc
acaacacgatcgggattattaacctcgcccatgcgtgcacgttttggtatacagagcaga
ctgcaatactacaaaaccgatttactaacaactatagtgcaacgaagtgccactatttta
gaggtgcccatctccatggaagccgccatagaaatagctggtagaagtcggggcacacct
agaattgcaaatgctttactgcgtcgggttcgcgacttcgctcaaattaaaggcaatggt
aaaatcgatataaaaatagcaaagtatgccttagaggctttaagtgttgatgcctatggt
ttagatgaaatggacaataagattttatcgaccataatcgataaatttaaaggcggtcct
gtgggtatctcgaccattgcaacggccgtaagtgagagtcccgaaactattgaagaggtt
tacgagcctttcttaatacaacaggggtttattatgcgtacaccacgcgggcgtgaagta
accgagcaagcgtataagcatttaggtaaaataaaaggtgcaacacagggcggtttattc
taa

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