Oceanihabitans sp. IOP_32: FEZ18_05540
Help
Entry
FEZ18_05540 CDS
T06249
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
oci
Oceanihabitans sp. IOP_32
Pathway
oci03030
DNA replication
oci03410
Base excision repair
oci03420
Nucleotide excision repair
oci03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
oci00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FEZ18_05540 (polA)
03410 Base excision repair
FEZ18_05540 (polA)
03420 Nucleotide excision repair
FEZ18_05540 (polA)
03440 Homologous recombination
FEZ18_05540 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
oci03032
]
FEZ18_05540 (polA)
03400 DNA repair and recombination proteins [BR:
oci03400
]
FEZ18_05540 (polA)
Enzymes [BR:
oci01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FEZ18_05540 (polA)
DNA replication proteins [BR:
oci03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
FEZ18_05540 (polA)
DNA repair and recombination proteins [BR:
oci03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
FEZ18_05540 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
FEZ18_05540 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH_2
RNase_H_2
HHH_5
HHH
SLS1_C
Motif
Other DBs
NCBI-ProteinID:
QFZ54287
UniProt:
A0A5Q0JTN2
LinkDB
All DBs
Position
1330714..1333566
Genome browser
AA seq
950 aa
AA seq
DB search
MSDNKRVFLVDAYALIFRGYYAFIKNPRINSKGLDTSAIMGFMNSLLDVIKRERPEHLAV
CFDKGGSSDRVEIFESYKANRDETPEAIKIAVPIIQDILKAMHIPIMVKTGYEADDVIGT
LAKQAEKEGYQTFMVTPDKDFAQLVSENIFMYRPVFGGGYETWGIPEVQKKFEVTDPLQV
IDFLGMMGDASDNIPGLPGVGEKTAKKFLAQYGSMENLLANTHELKGKMKEKIEANAELG
MLSKKLATIMLDVPVTFNAKDFELDQPDIPKVTEIFQELEFRRLIDNFTKTFSAEAVTPQ
AGNATEKASEGTPTKATPSEVKSAGAGQFSLFGAEDNSAEAQTSNTRNTSETAPHFYQSV
APGFATKLFLDNLMKQTTVCFDTETTGLNPITAELVGIAFSWEVGKGFYVPFPEDKTEAQ
ELIEQFRPFFESETIEKVGQNLKYDLKVLAKYNVDVKGKLFDTMLAHYLINPDMRHNMDV
LAETYLNYAPISITELIGKKGKNQLSMREVPLEKLTEYAVEDADITLQLKEHFEKELGEA
NTQKLFDEIEIPLLRVLAAMELEGINLDTEFLNSLSEDLNNDIATLEKQIYEVAGEAFNI
ASPKQLGIILFEKLKLVDNPKKTKTGQYATGEDILSFLAKDHAIIRDILEYRGLAKLKST
YVDALPLQVEPSTGRVHTEYMQAVAATGRLSSNNPNLQNIPIRTERGRQVRKAFIPRNDD
YTLLAADYSQIELRIIAALSQEETMIEAFNNGEDIHASTASKVFNVPLAEVTREQRANAK
TVNFGIIYGVSAFGLSNQTNLSRGEAKELIDTYYETYPKLKAYMTRQVDFARDHGYVQTV
LGRRRYLKDINSRNAVVRSGAERNAINAPIQGSAADIIKVAMIKIHEKLEAGQYKSKMLL
QVHDELVFDIFKPELEDMKTLIKTEMEQAYTLEVPLDVEMDVGDNWLEAH
NT seq
2853 nt
NT seq
+upstream
nt +downstream
nt
atgtctgataacaaacgtgtctttttagttgatgcctatgcattaatttttcgtggctat
tatgcctttataaaaaacccaagaattaattcgaaaggcttggatacctcggcaattatg
gggtttatgaattcgcttttagatgttataaaacgcgaacgacctgagcatctcgccgtc
tgttttgataaaggtggtagctccgatcgggtagaaatttttgaatcctacaaagccaat
agagatgaaacgccagaagccataaaaattgctgttcccataattcaagatattttaaaa
gccatgcacattcctattatggtaaaaacgggttacgaggccgatgatgttattggcaca
ctagccaaacaagccgaaaaagaaggctaccaaacgtttatggttacgccagacaaggat
tttgctcaactggtttcagaaaatatctttatgtatcgccccgtttttggtggcggatac
gaaacttggggcattccagaagtgcagaaaaaatttgaagttacagaccctttacaagtg
attgattttttgggtatgatgggcgatgcatccgataatattcctggtttacctggtgtt
ggcgaaaaaacggcgaaaaagtttttagcgcaatacggcagtatggaaaatcttttagcg
aatacacacgagctaaaaggtaaaatgaaagagaaaattgaagccaatgcagaattgggt
atgctgtctaaaaaattagccaccattatgctggatgttccggttacgtttaacgctaaa
gattttgaattagaccaacccgatattccgaaagttaccgagattttccaggaattagaa
tttagacgtttaatcgataatttcacgaaaacattttctgctgaggcggtaacacctcaa
gctggaaatgctaccgaaaaagcttcagaaggcacgccaacaaaagccacaccgagtgaa
gtgaaatcggctggagctggacaatttagtttgtttggagcagaagataattccgcggaa
gcgcaaacaagcaacactagaaacacctctgaaaccgccccgcatttttaccaaagtgta
gcccctggatttgccacaaaattgtttttagacaacctcatgaagcaaaccaccgtgtgt
ttcgataccgagaccacaggcttaaaccccataacggccgagttggttgggattgccttt
tcttgggaagttggcaagggcttttatgtgccttttccagaagataaaaccgaagcccaa
gaacttattgagcaatttagacccttttttgaaagtgaaaccattgaaaaagtgggtcag
aatttaaaatacgaccttaaggttttagcaaaatataatgtggatgtaaaaggcaaatta
ttcgataccatgttggcgcattatttaataaatccagatatgcggcacaatatggacgtg
cttgccgaaacgtatttgaattatgcgcccatttcgataaccgaactgattggcaaaaaa
ggtaaaaaccaactctcgatgcgcgaagtgcctttagagaaactaaccgaatatgcggtt
gaagatgccgatattaccttgcaacttaaagaacattttgaaaaagaattaggcgaagcc
aatacacagaaattgttcgatgagattgaaatcccattattgcgcgttttagcggctatg
gaattggaaggtattaatttagatacggagtttttaaattccttatcggaagacctcaat
aacgacatcgctacgcttgaaaagcaaatttatgaggttgcaggtgaagcgtttaatatt
gcttcaccaaaacaattgggtattattctgtttgaaaaacttaaattagttgacaaccct
aaaaaaaccaaaacagggcaatatgctactggcgaagatattttatcgtttttagcaaaa
gaccatgccattattcgagatattttagaatatcgaggccttgccaaactaaaaagcacc
tatgttgatgctttaccgctgcaagttgaacctagtacaggccgtgttcataccgagtat
atgcaagctgttgcagctactggccgattaagtagtaataatcccaatttacagaatata
ccaatacgtaccgaacgtggtcgccaagttagaaaagcctttatcccgcgtaatgacgat
tacaccttattggctgccgattattcgcaaatagaactgcgcattattgccgctttaagt
caagaggagaccatgattgaagcctttaataatggggaagatattcatgcctccaccgca
tcgaaagtatttaacgtaccgcttgccgaagtcaccagagaacaacgtgctaatgccaaa
actgttaatttcggaattatttatggcgtatcggcatttggattaagcaatcaaacgaat
ttatcgcgtggtgaagccaaagagttgatcgatacctactacgaaacctacccaaaacta
aaagcctatatgactaggcaggtggattttgctcgcgatcatggttatgtgcaaactgtt
ttagggcgacgccgttatttaaaagatattaattctcgtaatgctgtggtgcgcagcggt
gcagaacgaaatgccataaatgcacccatacaaggtagtgccgccgatattattaaggtt
gccatgattaaaattcacgaaaagctagaagctggccaatacaaatctaaaatgctctta
caagtgcatgatgaattggttttcgacatctttaaaccagaacttgaagacatgaaaacc
ttgattaaaaccgaaatggagcaagcttataccctcgaagtacctttggatgttgaaatg
gatgttggtgataattggttggaggcgcattaa
DBGET
integrated database retrieval system