KEGG   Oceanihabitans sp. IOP_32: FEZ18_05540
Entry
FEZ18_05540       CDS       T06249                                 
Symbol
polA
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
oci  Oceanihabitans sp. IOP_32
Pathway
oci03030  DNA replication
oci03410  Base excision repair
oci03420  Nucleotide excision repair
oci03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:oci00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    FEZ18_05540 (polA)
   03410 Base excision repair
    FEZ18_05540 (polA)
   03420 Nucleotide excision repair
    FEZ18_05540 (polA)
   03440 Homologous recombination
    FEZ18_05540 (polA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:oci03032]
    FEZ18_05540 (polA)
   03400 DNA repair and recombination proteins [BR:oci03400]
    FEZ18_05540 (polA)
Enzymes [BR:oci01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     FEZ18_05540 (polA)
DNA replication proteins [BR:oci03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     FEZ18_05540 (polA)
DNA repair and recombination proteins [BR:oci03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     FEZ18_05540 (polA)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     FEZ18_05540 (polA)
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N DNA_pol_A_exo1 5_3_exonuc DNA_polI_exo1 HHH_2 RNase_H_2 HHH_5 HHH SLS1_C
Other DBs
NCBI-ProteinID: QFZ54287
UniProt: A0A5Q0JTN2
LinkDB
Position
1330714..1333566
AA seq 950 aa
MSDNKRVFLVDAYALIFRGYYAFIKNPRINSKGLDTSAIMGFMNSLLDVIKRERPEHLAV
CFDKGGSSDRVEIFESYKANRDETPEAIKIAVPIIQDILKAMHIPIMVKTGYEADDVIGT
LAKQAEKEGYQTFMVTPDKDFAQLVSENIFMYRPVFGGGYETWGIPEVQKKFEVTDPLQV
IDFLGMMGDASDNIPGLPGVGEKTAKKFLAQYGSMENLLANTHELKGKMKEKIEANAELG
MLSKKLATIMLDVPVTFNAKDFELDQPDIPKVTEIFQELEFRRLIDNFTKTFSAEAVTPQ
AGNATEKASEGTPTKATPSEVKSAGAGQFSLFGAEDNSAEAQTSNTRNTSETAPHFYQSV
APGFATKLFLDNLMKQTTVCFDTETTGLNPITAELVGIAFSWEVGKGFYVPFPEDKTEAQ
ELIEQFRPFFESETIEKVGQNLKYDLKVLAKYNVDVKGKLFDTMLAHYLINPDMRHNMDV
LAETYLNYAPISITELIGKKGKNQLSMREVPLEKLTEYAVEDADITLQLKEHFEKELGEA
NTQKLFDEIEIPLLRVLAAMELEGINLDTEFLNSLSEDLNNDIATLEKQIYEVAGEAFNI
ASPKQLGIILFEKLKLVDNPKKTKTGQYATGEDILSFLAKDHAIIRDILEYRGLAKLKST
YVDALPLQVEPSTGRVHTEYMQAVAATGRLSSNNPNLQNIPIRTERGRQVRKAFIPRNDD
YTLLAADYSQIELRIIAALSQEETMIEAFNNGEDIHASTASKVFNVPLAEVTREQRANAK
TVNFGIIYGVSAFGLSNQTNLSRGEAKELIDTYYETYPKLKAYMTRQVDFARDHGYVQTV
LGRRRYLKDINSRNAVVRSGAERNAINAPIQGSAADIIKVAMIKIHEKLEAGQYKSKMLL
QVHDELVFDIFKPELEDMKTLIKTEMEQAYTLEVPLDVEMDVGDNWLEAH
NT seq 2853 nt   +upstreamnt  +downstreamnt
atgtctgataacaaacgtgtctttttagttgatgcctatgcattaatttttcgtggctat
tatgcctttataaaaaacccaagaattaattcgaaaggcttggatacctcggcaattatg
gggtttatgaattcgcttttagatgttataaaacgcgaacgacctgagcatctcgccgtc
tgttttgataaaggtggtagctccgatcgggtagaaatttttgaatcctacaaagccaat
agagatgaaacgccagaagccataaaaattgctgttcccataattcaagatattttaaaa
gccatgcacattcctattatggtaaaaacgggttacgaggccgatgatgttattggcaca
ctagccaaacaagccgaaaaagaaggctaccaaacgtttatggttacgccagacaaggat
tttgctcaactggtttcagaaaatatctttatgtatcgccccgtttttggtggcggatac
gaaacttggggcattccagaagtgcagaaaaaatttgaagttacagaccctttacaagtg
attgattttttgggtatgatgggcgatgcatccgataatattcctggtttacctggtgtt
ggcgaaaaaacggcgaaaaagtttttagcgcaatacggcagtatggaaaatcttttagcg
aatacacacgagctaaaaggtaaaatgaaagagaaaattgaagccaatgcagaattgggt
atgctgtctaaaaaattagccaccattatgctggatgttccggttacgtttaacgctaaa
gattttgaattagaccaacccgatattccgaaagttaccgagattttccaggaattagaa
tttagacgtttaatcgataatttcacgaaaacattttctgctgaggcggtaacacctcaa
gctggaaatgctaccgaaaaagcttcagaaggcacgccaacaaaagccacaccgagtgaa
gtgaaatcggctggagctggacaatttagtttgtttggagcagaagataattccgcggaa
gcgcaaacaagcaacactagaaacacctctgaaaccgccccgcatttttaccaaagtgta
gcccctggatttgccacaaaattgtttttagacaacctcatgaagcaaaccaccgtgtgt
ttcgataccgagaccacaggcttaaaccccataacggccgagttggttgggattgccttt
tcttgggaagttggcaagggcttttatgtgccttttccagaagataaaaccgaagcccaa
gaacttattgagcaatttagacccttttttgaaagtgaaaccattgaaaaagtgggtcag
aatttaaaatacgaccttaaggttttagcaaaatataatgtggatgtaaaaggcaaatta
ttcgataccatgttggcgcattatttaataaatccagatatgcggcacaatatggacgtg
cttgccgaaacgtatttgaattatgcgcccatttcgataaccgaactgattggcaaaaaa
ggtaaaaaccaactctcgatgcgcgaagtgcctttagagaaactaaccgaatatgcggtt
gaagatgccgatattaccttgcaacttaaagaacattttgaaaaagaattaggcgaagcc
aatacacagaaattgttcgatgagattgaaatcccattattgcgcgttttagcggctatg
gaattggaaggtattaatttagatacggagtttttaaattccttatcggaagacctcaat
aacgacatcgctacgcttgaaaagcaaatttatgaggttgcaggtgaagcgtttaatatt
gcttcaccaaaacaattgggtattattctgtttgaaaaacttaaattagttgacaaccct
aaaaaaaccaaaacagggcaatatgctactggcgaagatattttatcgtttttagcaaaa
gaccatgccattattcgagatattttagaatatcgaggccttgccaaactaaaaagcacc
tatgttgatgctttaccgctgcaagttgaacctagtacaggccgtgttcataccgagtat
atgcaagctgttgcagctactggccgattaagtagtaataatcccaatttacagaatata
ccaatacgtaccgaacgtggtcgccaagttagaaaagcctttatcccgcgtaatgacgat
tacaccttattggctgccgattattcgcaaatagaactgcgcattattgccgctttaagt
caagaggagaccatgattgaagcctttaataatggggaagatattcatgcctccaccgca
tcgaaagtatttaacgtaccgcttgccgaagtcaccagagaacaacgtgctaatgccaaa
actgttaatttcggaattatttatggcgtatcggcatttggattaagcaatcaaacgaat
ttatcgcgtggtgaagccaaagagttgatcgatacctactacgaaacctacccaaaacta
aaagcctatatgactaggcaggtggattttgctcgcgatcatggttatgtgcaaactgtt
ttagggcgacgccgttatttaaaagatattaattctcgtaatgctgtggtgcgcagcggt
gcagaacgaaatgccataaatgcacccatacaaggtagtgccgccgatattattaaggtt
gccatgattaaaattcacgaaaagctagaagctggccaatacaaatctaaaatgctctta
caagtgcatgatgaattggttttcgacatctttaaaccagaacttgaagacatgaaaacc
ttgattaaaaccgaaatggagcaagcttataccctcgaagtacctttggatgttgaaatg
gatgttggtgataattggttggaggcgcattaa

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