Oceanihabitans sp. IOP_32: FEZ18_07160
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Entry
FEZ18_07160 CDS
T06249
Symbol
serS
Name
(GenBank) serine--tRNA ligase
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
oci
Oceanihabitans sp. IOP_32
Pathway
oci00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
oci00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
FEZ18_07160 (serS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
oci01007
]
FEZ18_07160 (serS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
oci03016
]
FEZ18_07160 (serS)
Enzymes [BR:
oci01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
FEZ18_07160 (serS)
Amino acid related enzymes [BR:
oci01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
FEZ18_07160 (serS)
Transfer RNA biogenesis [BR:
oci03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
FEZ18_07160 (serS)
Prokaryotic type
FEZ18_07160 (serS)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
DUF4164
Terminase_2
Motif
Other DBs
NCBI-ProteinID:
QFZ54591
UniProt:
A0A5Q0JV32
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All DBs
Position
1718556..1719827
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AA seq
423 aa
AA seq
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MLQVPFIRENKALVIERLAKRNIDATEMIEAVIALDDDRKRLQSELDNTLAESNTLSKQI
GILYKSGEAQKANALKDKTSALKDSSKTLNDDLNNTVVALHELLCKIPNVPNQIVPSGST
EDDNLEVYKEGDIPVLSDNALPHWELAKKYDIIDFELGNKITGAGFPVYKGKGAKLQRAL
ITYFLDKNTAAGYTEYQLPLLVNEDSGFGTGQLPDKEGQMYHVTGDNLYLIPTAEVPGTN
IFRDVVLNETELPIAVTGYTPCFRREAGSYGAHVRGLNRLHQFDKVEILRVEHPSKSYEA
LEGMVNHVKTILQELKLPYRILRLCGGDLGFTSALTYDFEVFSTAQDRWLEISSVSNFET
FQANRLKLRFKNSEGKNELAHTLNGSALALPRVLAGILENYQTEEGILIPEVLQPYTGFS
IIN
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atgttacaagtcccttttattagagagaacaaagccttggtaattgaaagattagcaaaa
agaaatatagacgcaaccgaaatgattgaagctgttatagcgcttgatgacgataggaag
cggttgcaatcggagttggataatactttggcagaatcaaataccttatctaaacaaatt
gggatcttatataaatctggcgaagcgcaaaaagcaaatgctttaaaagataaaactagt
gcgcttaaagacagttctaaaacacttaatgatgaccttaacaacaccgttgtagcctta
catgagttgttgtgtaaaataccaaacgtaccgaaccaaatcgtcccttctggaagtaca
gaagacgataatttagaggtttataaagaaggagatattcctgttttaagcgataatgcc
ctgccacactgggagttagctaagaaatacgatatcatagattttgaacttggtaataaa
ataactggtgcgggattcccagtttataaaggtaagggggctaaattacaacgtgcttta
attacttattttttagataaaaatacggcagcaggttacaccgaatatcaattaccactt
ttggtgaatgaagactctggttttggtacgggacaattgccagataaagaagggcaaatg
tatcacgtaaccggagataatttatacttaataccaacggcagaggtgccaggaactaat
atttttagagatgtggtgttaaatgaaaccgaattgcctattgcagttacgggttatacg
ccatgttttcgtcgagaggctggcagttatggtgcgcatgttagaggtttaaataggtta
caccaatttgataaggttgaaattttacgggtagaacatcccagcaaatcatacgaagct
ttagagggtatggtaaaccacgttaaaactattttacaagaattaaaactgccttataga
attttaagactttgcggtggcgatttagggtttacttcggcactaacttacgattttgaa
gtgttttctacagcccaagatcgttggttagaaatttcttcagtatctaattttgaaact
tttcaggccaatcgtctaaaattacgttttaaaaatagtgagggtaaaaacgaattagca
cacacgttaaatggcagtgcattggctttaccaagagtgttggctggaattttagaaaac
taccaaaccgaagaaggtattctaattccagaagtattgcagccttatacagggttttcc
attattaattaa
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