Oceanihabitans sp. IOP_32: FEZ18_07500
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Entry
FEZ18_07500 CDS
T06249
Symbol
rnc
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
oci
Oceanihabitans sp. IOP_32
Brite
KEGG Orthology (KO) [BR:
oci00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
FEZ18_07500 (rnc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oci03019
]
FEZ18_07500 (rnc)
03009 Ribosome biogenesis [BR:
oci03009
]
FEZ18_07500 (rnc)
03036 Chromosome and associated proteins [BR:
oci03036
]
FEZ18_07500 (rnc)
Enzymes [BR:
oci01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
FEZ18_07500 (rnc)
Messenger RNA biogenesis [BR:
oci03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
FEZ18_07500 (rnc)
Ribosome biogenesis [BR:
oci03009
]
Eukaryotic type
90S particles
RNase
FEZ18_07500 (rnc)
Prokaryotic type
rRNA processing factors
FEZ18_07500 (rnc)
Chromosome and associated proteins [BR:
oci03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
FEZ18_07500 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
DSRM_2
DND1_DSRM
Motif
Other DBs
NCBI-ProteinID:
QFZ54646
LinkDB
All DBs
Position
complement(1800974..1801714)
Genome browser
AA seq
246 aa
AA seq
DB search
MKSIRNILNSRFKGNGNFFLQLTKILGFKPKHVKFYSTAFTHRSMNIKDSKGHAINYERL
EFLGDAMLSAVIASHLYLEVPSGDEGYLTKMRSKIVSRAHLNQLGKDLNLIDFVESKIPT
GQFGDNIHGNLFEALVGAIFLDRGYKYCEKFIFKRVIIPYVDIATLEGKVISYKSLLIEW
CQKEKKTFDYKVYEDTGKDEVRHFSVKLSIDNKVVSKARGTSKKKAEEKASKRAFFAFQD
KISREI
NT seq
741 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagcattcgtaacatattaaattcccgttttaaaggtaacgggaattttttttta
caattaactaaaattctcgggtttaaacctaagcatgtcaagttttatagcacagccttt
acacaccgttctatgaacattaaagacagtaaaggtcatgctattaattacgaacgccta
gagtttttaggcgatgctatgttaagtgctgttattgcatcgcatttatatcttgaagtt
cctagcggcgacgaaggttatcttacaaaaatgcgctctaaaattgtaagtagagcacat
ttaaaccagcttggtaaagacctaaatttaatagattttgtagaaagcaaaatacctact
ggacaatttggagacaacattcacggtaatttgtttgaggctttagtaggtgctatcttt
cttgatagaggctataagtattgtgaaaaatttatttttaagcgtgttataattccctat
gtagatattgccactttagaaggtaaggttataagctataaaagtttgctaattgagtgg
tgccaaaaagaaaagaaaaccttcgattataaagtgtatgaagacacgggtaaagatgag
gttaggcatttttcagtcaagctatctatcgataacaaggtggtttctaaggctagaggc
acctctaagaaaaaggccgaagaaaaagcctctaaacgtgctttctttgcttttcaagat
aaaatatcaagggaaatttag
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