Oceanihabitans sp. IOP_32: FEZ18_07710
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Entry
FEZ18_07710 CDS
T06249
Symbol
rimK
Name
(GenBank) 30S ribosomal protein S6--L-glutamate ligase
KO
K05844
ribosomal protein S6--L-glutamate ligase [EC:6.3.2.-]
Organism
oci
Oceanihabitans sp. IOP_32
Brite
KEGG Orthology (KO) [BR:
oci00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
oci03009
]
FEZ18_07710 (rimK)
Ribosome biogenesis [BR:
oci03009
]
Prokaryotic type
ribosomal protein modification factors
FEZ18_07710 (rimK)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RimK
Rimk_N
GSH-S_ATP
ATPgrasp_ST
ATP-grasp_3
ATPgrasp_YheCD
ATP-grasp
Dala_Dala_lig_C
Motif
Other DBs
NCBI-ProteinID:
QFZ54688
UniProt:
A0A5Q0JW71
LinkDB
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Position
complement(1859245..1860120)
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AA seq
291 aa
AA seq
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MNIVILSRNASLYSTKRLVEAAENRGHKVEIIDPLKCDIIIEKEKPSIYYKDRYLDYVDA
IIPRIGASITFYGCAVVRQFEEMGVFTISPSDSILKSRDKLRSLQSLSKAGIGMPKTVFT
NYSRDIEEVIEHVGGTPLIIKLLEGTQGLGVVLAETQNAAQSVLEAFNGLQARVIVQEFI
KEAKGADLRALVVDGQVVGAMKRQGKAGEFRSNLHRGGSANIITLDDEELKVALSAAKVL
KLPVCGVDMLQSARGPLLLEVNSTPGLEGIEDATGKDIAASIIRFIERNTN
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atgaatatcgtaattttatcaagaaacgcctccctatactctacaaagcgtcttgttgaa
gcggctgaaaacagaggtcataaagttgaaattatcgaccctttaaaatgtgatattatc
atagaaaaggaaaagccttctatttattataaagaccgataccttgattatgtagatgcc
attattccaagaattggtgcatctatcaccttttatggttgtgctgtagttagacagttt
gaagaaatgggcgtttttaccatttctccatcagattctattttaaaatctagagataaa
ctacgcagcttacaaagcctaagtaaagctggaataggcatgcctaaaaccgtatttaca
aactattctagagatattgaagaagttatagagcatgttggagggacacctttaattata
aaactattggagggcacccaaggcttaggggtggttttagccgaaactcaaaatgccgcg
caatctgttttagaagcctttaatggtttacaagctagagtgattgtgcaagagtttata
aaagaagcaaaaggtgcagatttacgtgctttagttgtagatggtcaagttgttggcgct
atgaaacgccaaggtaaagcaggtgaatttcgatctaatttacaccgcggtggttcggca
aatattattacattagacgacgaagaactaaaagtcgctttaagtgctgctaaagtttta
aaactgcctgtttgcggtgtagacatgctacaatcggcacgtggccctttattgttggaa
gttaactctacaccaggactggaaggtattgaagacgctacaggtaaagatattgccgca
tcgattattcgttttattgagcgcaacacgaattaa
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