Oceanihabitans sp. IOP_32: FEZ18_09155
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Entry
FEZ18_09155 CDS
T06249
Symbol
miaB
Name
(GenBank) tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
oci
Oceanihabitans sp. IOP_32
Brite
KEGG Orthology (KO) [BR:
oci00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
oci03016
]
FEZ18_09155 (miaB)
Enzymes [BR:
oci01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
FEZ18_09155 (miaB)
Transfer RNA biogenesis [BR:
oci03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
FEZ18_09155 (miaB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
TRAM_2
Motif
Other DBs
NCBI-ProteinID:
QFZ54954
UniProt:
A0A5Q0JVI1
LinkDB
All DBs
Position
complement(2199650..2201098)
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AA seq
482 aa
AA seq
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MEKIIDESKQGQSLVLDHKKENTRKLFIESYGCAMNFSDSEIVASILTNEGFNTTQTLEE
ADLVLVNTCSIRDKAEQTIRKRLEKYNAVKRDLNPKMKVGVLGCMAERLKTKFLEEEKIV
DLVVGPDAYKDLPNLLAEVDQGRDAINVILSKDETYGDISPVRLNSNGVTAFVSITRGCD
NMCTFCVVPFTRGRERSRDPQSIIEEINDLWHKGYKEITLLGQNVDSYLWYGGGLKKDFN
KASDMQKATAVNFSNLLEICAKAQPKMRIRFSTSNPQDLTLDVVKTMAKHQNICKHIHLP
VQSGSNRILKAMNRLHTREEYMQLIDQIREIIPDCAISQDMIIGFPTETETDFQDTLSLM
AYVKYNFGYMYAYSERPGTMAGRNMEDDIPEAVKKRRLQDVVDLQRKHSEITTKTWLNKT
VEVLIEKESKKSESQWSGRTPQNIVCVFPKENYNIGEFVNVKVTDCTSATLIGEAVSLSD
NN
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atggagaaaataatagacgaaagcaaacagggtcaatctttagtattagaccataaaaaa
gaaaatacacgtaaactttttattgaaagctatggctgtgccatgaattttagcgatagt
gagattgtagcttccatcttaaccaacgagggatttaacactactcaaaccttagaagag
gctgatttggtattggttaacacttgctctattcgggataaagcagaacaaaccatacgc
aaacgtttagaaaaatataacgctgtaaaacgcgacctaaatccaaagatgaaagtgggc
gttttgggctgcatggcagaacgcctgaaaacaaaatttcttgaagaagaaaaaattgtt
gatttagttgttggtccagatgcttacaaagacctacccaatcttcttgccgaagttgat
caaggtagagacgcgataaacgtgatcctctctaaagacgaaacctacggagacatttct
ccggttagattaaacagcaatggagtcaccgcgtttgtatcgattactcgtggttgtgat
aatatgtgtaccttctgcgtggtgccttttacacgggggagagaacgcagtagagatccg
cagagtattatagaagaaattaacgacttatggcacaaaggatataaagaaatcaccttg
cttggacaaaacgtggacagctatctgtggtatggcggtggtttaaaaaaagattttaat
aaagccagcgacatgcaaaaagctacagctgtaaatttttctaatttattggaaatttgt
gcgaaagcccagcctaaaatgcgtattcgtttttcgacatcaaacccacaagatttaacg
cttgatgttgttaagaccatggcgaagcaccaaaacatatgtaagcacatacacctacca
gtgcaaagtggcagtaaccgcattttaaaagccatgaaccgcttacatacgcgagaagaa
tacatgcaacttatagatcaaattcgcgaaattattccagactgcgctataagtcaagat
atgattattggatttcctaccgaaacagaaaccgattttcaagacaccttgtctttaatg
gcctacgtaaaatataattttggttatatgtatgcttattcagagcgcccaggcaccatg
gcaggacgcaatatggaagacgacatccctgaagccgtaaaaaaaagacgccttcaagac
gtcgtcgatttacagcgtaaacacagtgaaattactacgaaaacatggcttaacaaaacg
gtagaagttttaattgaaaaagagtcgaaaaaatctgaatcacaatggtctggccgcacg
cctcaaaacatagtttgtgtgtttccaaaagaaaattataacattggcgagtttgtaaat
gtaaaagttacagattgcaccagtgccactctaattggagaagctgtaagtttaagtgat
aataattaa
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