Oceanihabitans sp. IOP_32: FEZ18_09275
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Entry
FEZ18_09275 CDS
T06249
Name
(GenBank) PAS domain S-box protein
KO
K12146
hydrogenase-4 transcriptional activator
Organism
oci
Oceanihabitans sp. IOP_32
Brite
KEGG Orthology (KO) [BR:
oci00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oci03000
]
FEZ18_09275
Transcription factors [BR:
oci03000
]
Prokaryotic type
Helix-turn-helix
Other families
FEZ18_09275
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
PAS_9
Sigma54_activ_2
AAA_5
PAS
AAA_2
AAA
PAS_4
HTH_8
PAS_3
DUF2205
AAA_3
MCM
ATPase
Phage_sheath_1N
AAA_22
nSTAND3
AAA_16
Motif
Other DBs
NCBI-ProteinID:
QFZ54974
UniProt:
A0A5Q0JVK2
LinkDB
All DBs
Position
2231594..2233711
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AA seq
705 aa
AA seq
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MTEEKEIGFIKAWLVDALPYEVFWAKEDGSLVYGNPKLCERLGYKRTELTKLTIFDINTT
VTPESWQRHWEALKRNKIESFQAVHKNKSGAFYEVEVYAQFFSNNRKEMVCAIMRDITSS
SFYKNLVNNVESMAKVGGWDLNLQDGSILVTPEAFRIFNTEIKEDFHPSKIVQYFKDGER
FRKHIIETTRNAVPFDGVFETKETPSRFIRSIVKPLLKGDKVYKVVGIYQDLTEQVKREN
KLNFFKDVIDNAQDLIYVYNKSGKLLEYSNSVSSTLGFSKKELDRATVFDLDTSVTEAWW
ESHFSEIKKNGSLQMEWLLTKKDGTKFPADVVANYMHYEGQDINCAVVRDITTRKERDVK
LFQALEEIKSLKDKLEVENEYLQEEISSSINAGNIKCKSEVYAKVLEQVYLVAPTDTTVL
ITGESGTGKELLATAVHANSSRKNRPLIKINCATLPKELIESELFGHKKGAFTGAVADKV
GKFTLADGGSIFLDEIGEMPIDLQSKLLRVLQEGEFDELGGSKTIKVDVRVIAATNRDLA
EMIKEGRFREDLYYRLNVFPIYNIPLRERKEDIPLLAQFFLEKFSTRAGKAFKRLSKKTV
AALMAYDFPGNIRELENLIERAVIIENGTILNTGSWMPTVSKNTKASELLTFEEAQRQHI
IAVLKRTKGKVSGINGAAGILDMNAKTLFAKMKKLGIEKETIFKT
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaagaaaaagaaataggatttattaaagcgtggttagtcgacgccttaccgtat
gaagtgttttgggctaaagaagatggtagtctggtttatggtaatccaaagctttgtgaa
cgacttggttataaaagaactgagcttactaagcttactatatttgatataaacactacc
gtaactccagaaagttggcagcgacattgggaggctttaaagcgtaataagattgaaagt
tttcaagctgtccataagaataaatctggtgctttttatgaagttgaggtttatgctcaa
tttttctcaaataacagaaaagagatggtatgtgctattatgcgcgacattacatcgtct
agtttttataaaaatttggttaataatgtcgaatccatggctaaagtaggtgggtgggat
cttaatcttcaagatggttctatattagtaactcccgaagcttttaggatatttaataca
gaaattaaggaagattttcaccctagcaaaattgtccagtattttaaggatggagaacgt
tttagaaaacacattattgaaacgactagaaacgctgtaccttttgatggagtttttgag
accaaagaaacgcctagtagatttatacgctctattgtaaagcccttattaaaaggtgat
aaggtttataaggtagtgggtatttatcaagatttaacagagcaagtaaaacgggaaaat
aagcttaatttctttaaagacgttatcgataatgcgcaagatttgatttacgtctataac
aaatctggtaaattgttagaatacagcaactcggtttcaagcacattagggttttctaaa
aaagaattagaccgtgctactgtttttgatttagatacgagtgttacagaggcatggtgg
gaatcacatttctcagagattaaaaaaaacggctcattacaaatggaatggttgcttact
aaaaaagatggtaccaagtttcctgcagatgtagtggctaactatatgcattatgaaggt
caagatataaattgtgccgtggtgcgcgatattaccactagaaaagaacgagatgtaaaa
ctttttcaagcacttgaagagataaagtctttaaaggataagttagaagttgaaaacgag
tatttacaagaagagataagtagtagcataaatgcaggtaatattaaatgtaaaagcgag
gtttatgccaaggttttagaacaagtataccttgttgctccaacagatactaccgtttta
attactggcgaatcgggtacaggaaaagaattgttagccactgcagtacatgctaatagc
tcgcggaaaaaccggcctcttataaaaattaactgtgccaccttgccaaaagagcttatt
gaaagtgagttgtttggtcataaaaaaggggcttttactggagctgtggccgataaagtt
ggtaagtttactctggccgatggcggcagcatttttctagatgaaattggtgaaatgcct
atagatttgcaatctaaattattacgggttctacaagaaggtgaatttgatgaattgggc
gggtctaaaaccattaaagtggacgtaagagtaattgctgcaacaaatcgggatcttgca
gaaatgataaaagaaggtcgttttagagaagatttatattacagattaaatgtctttcct
atttataatataccccttcgagagcgaaaagaagacatcccgcttttagcccaatttttt
ttagaaaaattttctacaagagcaggtaaagcatttaaacgactatcaaaaaaaacggta
gcggctcttatggcgtacgatttccctggtaatattagagagctagaaaatttaatagag
cgcgccgtaattattgaaaatggcacaatattaaatacaggaagttggatgcccaccgtt
tcaaaaaacacaaaagcctctgagctgctcacatttgaagaagctcaaagacaacatatt
atagctgttttaaagcgcactaaaggtaaagtgagcggcataaacggtgccgctggtatt
cttgatatgaatgctaaaaccttatttgcaaaaatgaaaaaactaggtatcgaaaaagaa
actatttttaaaacttaa
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