Oceanihabitans sp. IOP_32: FEZ18_10060
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Entry
FEZ18_10060 CDS
T06249
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K03086
RNA polymerase primary sigma factor
Organism
oci
Oceanihabitans sp. IOP_32
Pathway
oci02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
oci00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
FEZ18_10060
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
oci03021
]
FEZ18_10060
Transcription machinery [BR:
oci03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
FEZ18_10060
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r1_2
Sigma70_r4_2
Motif
Other DBs
NCBI-ProteinID:
QFZ55111
LinkDB
All DBs
Position
complement(2415864..2416727)
Genome browser
AA seq
287 aa
AA seq
DB search
MRQLKITKQVTNRETASLDKYLQEIGKVDLITADEEVELAQRIKAGDQIALEKLTKANLR
FVVSVAKQYQNQGLTLPDLINEGNLGLIKAAQRFDETRGFKFISYAVWWIRQSILQALAE
QSRIVRLPLNKIGSINKINKTFAFLEQSHERPPSAEEIAKELDMTINDVKESMKNSGRHV
SMDAPLVEGEDSNLYDVLNSGESPNPDKELLHESLRTEIERALETLTPREADVIRLYFGL
GSQHPMTLEEIGETFDLTRERVRQIKEKAIRRLKHTSRSKILKTYLG
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgagacaacttaaaattacgaagcaggttaccaacagagaaacagcatctttagataaa
taccttcaagaaattggaaaagttgacttaattaccgcagacgaagaagtagaattagca
caacgtattaaggctggagatcaaatcgccttagagaaattaaccaaagctaatttacgt
tttgttgtatcggtagctaagcaataccaaaatcaaggtcttaccttaccagatttaatt
aatgaaggtaatttaggattaattaaagctgctcaacgttttgatgaaacacgtggtttt
aaatttatttcgtacgctgtttggtggattcgtcaatccattcttcaggctttagccgag
caatctcgtattgttcgcttaccattaaataaaattggttcaattaacaaaattaataaa
acatttgcctttttagagcaaagtcacgaacgtccaccttctgcagaagaaattgctaaa
gaattggatatgactattaacgacgttaaagaatctatgaaaaactctggtcgccatgta
agtatggatgcgccgttagttgaaggagaagattctaacttatacgatgttttaaatagt
ggtgaatctccaaatccagacaaagagttattacacgaatcgctgcgtacagaaattgag
cgcgctttagaaactttaactccgcgtgaggcagacgttatccgcttatactttggtttg
ggaagtcaacaccctatgacgcttgaagaaattggagaaacattcgatttaactcgtgag
cgcgtaagacaaataaaagaaaaagcgataagaagattaaagcacacttctagaagtaaa
atactgaaaacatatttaggttaa
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