Oceanihabitans sp. IOP_32: FEZ18_11780
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Entry
FEZ18_11780 CDS
T06249
Name
(GenBank) exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
oci
Oceanihabitans sp. IOP_32
Pathway
oci03030
DNA replication
oci03430
Mismatch repair
oci03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
oci00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FEZ18_11780
03430 Mismatch repair
FEZ18_11780
03440 Homologous recombination
FEZ18_11780
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
oci03032
]
FEZ18_11780
03400 DNA repair and recombination proteins [BR:
oci03400
]
FEZ18_11780
Enzymes [BR:
oci01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FEZ18_11780
DNA replication proteins [BR:
oci03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
FEZ18_11780
DNA repair and recombination proteins [BR:
oci03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
FEZ18_11780
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
GIY-YIG
RNase_H_2
DEDDh_C
GIY_YIG_2
DNA_pol_A_exo1
DUF7508
DUF790
DUF123
T5orf172
Motif
Other DBs
NCBI-ProteinID:
QFZ55434
LinkDB
All DBs
Position
complement(2810621..2811985)
Genome browser
AA seq
454 aa
AA seq
DB search
MYAILDIETTGGKYNEEGITEIAIYKYDGHQVVDQFISLINPEREIQPFVVNLTGINSKM
LRNAPKFYEVAKRIVEITEDCILVAHNAQFDNRILKTEFRRLGFDFERKTLCTVELAKDL
IPGQASYSLGKLVRSLGIPVTDRHRASGDALATVKLFKMLLDKDTSKNIIQQSIRLNPKF
QLEPRLLDIIEQMPSVTGVYYMHKADGEIIYIGKSNNIKKRINQHFTNTNQKSKKIQQHV
ATVTYDATGSELVALLKESAEIKSNKPIYNRALRRHVFTHALYHFKDENGYINLKIDVAD
GRKKPITTFTNRESGKAFITKAVEDYKLCQKLVGLYKTKTSCFGYEIKTCNGACINKETP
EIYNQRVESLIEKNSYKNKNMVIVDKGRAIDERSAILIENGVFKGYGYFNLNYQINNIEV
LESIITPMENNRDTQHIIQGYLRKNKRLKIIRLN
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
ttgtacgcaatattagacatagaaaccactggaggcaagtataatgaagaaggcattaca
gaaattgccatttacaaatacgatggtcaccaagttgtagaccaatttataagtcttata
aacccagaacgcgaaatacaaccttttgtagtaaatcttaccggtataaatagcaaaatg
ctacgaaatgcacctaagttttatgaggtcgctaagcgcattgtagaaattaccgaagat
tgcattctggtagcccataacgctcaatttgacaacagaattttaaaaaccgaatttaga
cgcttgggtttcgattttgagcgtaaaaccctctgcaccgtagaattggcaaaagattta
ataccggggcaagcctcgtacagtctgggtaagttggtgcgctcacttggcattccggtt
accgataggcatcgggcttcgggcgatgctttagcaaccgtgaaattgtttaaaatgttg
ttggataaagacacctcaaaaaatattattcaacaatctatccgcttaaatcccaagttt
caactagagccaagacttctagatattattgagcaaatgccatctgtaactggtgtgtat
tatatgcataaagccgatggagaaattatatacattggcaaaagtaacaatattaaaaaa
cgaatcaatcagcatttcacaaacaccaatcagaaatctaaaaaaattcaacaacatgtg
gccacggtaacttacgatgccactggaagtgaattggtagccctattaaaagaaagcgca
gaaattaaaagcaataagcccatttataacagagcattaagacgccatgtatttactcat
gccctctatcattttaaagatgaaaatggttatattaatttaaaaattgatgtggccgat
ggtagaaaaaaaccaatcacaacgtttactaaccgcgaaagcggaaaagcttttattaca
aaagcggttgaagattacaagctctgccaaaaactagtaggactctacaaaaccaagacc
agttgttttggctacgagattaaaacctgtaatggggcgtgtataaataaagaaactcca
gaaatttacaaccaacgtgtagaatctttaattgaaaaaaacagctacaaaaacaagaat
atggttattgtggacaaaggcagagcaatagacgaacgtagtgccatactaattgaaaac
ggggtatttaaaggctatggctattttaatttgaattatcaaataaataatattgaggta
ttagaatctattattaccccaatggagaacaatagagatactcaacatattattcaaggc
tacttgagaaaaaataaacggttaaaaattattaggttaaattaa
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