Oceanihabitans sp. IOP_32: FEZ18_11945
Help
Entry
FEZ18_11945 CDS
T06249
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
oci
Oceanihabitans sp. IOP_32
Pathway
oci00260
Glycine, serine and threonine metabolism
oci00460
Cyanoamino acid metabolism
oci00630
Glyoxylate and dicarboxylate metabolism
oci00670
One carbon pool by folate
oci00680
Methane metabolism
oci01100
Metabolic pathways
oci01110
Biosynthesis of secondary metabolites
oci01120
Microbial metabolism in diverse environments
oci01200
Carbon metabolism
oci01230
Biosynthesis of amino acids
oci01240
Biosynthesis of cofactors
Module
oci_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
oci00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
FEZ18_11945
09102 Energy metabolism
00680 Methane metabolism
FEZ18_11945
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
FEZ18_11945
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
FEZ18_11945
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
FEZ18_11945
Enzymes [BR:
oci01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
FEZ18_11945
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Beta_elim_lyase
DegT_DnrJ_EryC1
Aminotran_1_2
Motif
Other DBs
NCBI-ProteinID:
QFZ55464
UniProt:
A0A5Q0JWT9
LinkDB
All DBs
Position
2853762..2855033
Genome browser
AA seq
423 aa
AA seq
DB search
MQRDEIIFELIQDEKERQLKGLELIASENFVSDQVMEAAGSVLTNKYAEGYPGKRYYGGC
EVVDKVEQIAIDRAKALFGAAYVNVQPHSGSQANTAVYHACLNPGDKILGFDLSHGGHLT
HGSPVNFSGKLYKPSFYGVEKETGVLNYDKIQDIATKEQPKLIIAGASAYSRDMDFKRFR
EIADSVGAILLADISHPAGLIAKGILNDPLPHCHIVTTTTHKTLRGPRGGLIMMGQDFDN
PFGITLKNGSLRKMSSLLDSAVFPGNQGGPLEHIIAAKAIAFGEALTDDFLHYQLQVKAN
ANAMANAFVSKGYHIISGGTDNHCMLIDLRNKDISGKDAENALGKADITVNKNMVPFDDK
SPFVTSGIRIGTSAITTRGLKEDQMQIIVDLIDEVITNHDNDAVLETVKDKVNTMMEVKP
LFV
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atgcaacgcgacgaaataatttttgaacttatacaagacgaaaaagaacgccaattaaaa
ggcttagaacttattgcatcagaaaattttgtaagcgaccaggttatggaagctgcagga
tctgtattaaccaataaatatgccgagggttacccaggaaagcgttattacggcggttgt
gaagttgtggataaagtggagcaaattgctatcgatagagctaaagccttgtttggtgcc
gcttatgtaaatgttcagccacactccggaagtcaagccaatacagctgtttatcatgcg
tgtttaaatccaggtgataaaattttaggattcgatttatctcatggcggtcatttaacc
catggatcaccagtaaatttttcaggaaaattatacaaaccttctttttatggtgtagag
aaagaaaccggggttttaaattatgataaaatacaagatatcgcaactaaagagcaacca
aaacttattattgctggtgcttcggcttactctcgtgatatggattttaaacgttttaga
gagattgcagatagtgtaggcgctattttacttgcagatatttctcaccctgcaggatta
attgcaaagggtattttaaacgatcctttaccacactgtcatattgttaccactacaacg
cataaaacactacgtggcccaagaggtggattaataatgatggggcaagattttgacaat
ccctttggtatcactttaaaaaacggaagtttacgaaaaatgtcatccttacttgattct
gctgtttttccaggtaaccaaggtggaccattagagcatattattgctgctaaagccatt
gcttttggggaagccctaaccgatgattttttacattatcagttacaagttaaggcaaac
gccaacgctatggcaaatgcatttgtttctaaaggttaccatattatttctggaggaaca
gataatcactgtatgttaatcgatttacgtaacaaggacatttctggtaaagatgctgaa
aatgctttaggtaaagccgatatcacagtgaataaaaacatggtgccttttgatgataaa
tcaccatttgtaacctcgggtataaggattggaacatcggccataacaacccgcgggtta
aaagaagaccagatgcaaattattgttgatttaatagacgaagttatcactaatcacgat
aatgatgcggttttagaaactgttaaagataaagtaaatacgatgatggaagttaaacca
ttgtttgtataa
DBGET
integrated database retrieval system