KEGG   Oceanihabitans sp. IOP_32: FEZ18_12865
Entry
FEZ18_12865       CDS       T06249                                 
Name
(GenBank) signal recognition particle protein
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
oci  Oceanihabitans sp. IOP_32
Pathway
oci02024  Quorum sensing
oci03060  Protein export
oci03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:oci00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    FEZ18_12865
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    FEZ18_12865
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    FEZ18_12865
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:oci02044]
    FEZ18_12865
Enzymes [BR:oci01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     FEZ18_12865
Secretion system [BR:oci02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   FEZ18_12865
  Eukaryotic Sec-SRP protein
   FEZ18_12865
SSDB
Motif
Pfam: SRP54 SRP_SPB SRP54_N Zeta_toxin cobW AAA_22 CbiA nSTAND3 CLP1_P APS_kinase 6PF2K AAA_24 AAA_33 DO-GTPase1 KAP_NTPase KTI12 ResIII AAA_16 TsaE NPHP3_N AAA_31 NACHT AAA_18 ATP_bind_1 AAA_17 Thymidylate_kin ArsA_ATPase AAA_19
Other DBs
NCBI-ProteinID: QFZ55629
LinkDB
Position
3059693..3061021
AA seq 442 aa
MFNNLSDKLDKALHVLKGHGSITEVNVAETLKEVRRALLDADVNFKIAKDFTNRVKEKAL
GANVLTTLQPGQLMVKIVKDELTELMGGEAEGINLSGNPTVILMSGLQGSGKTTFSGKLA
NYLKNKKTKKPLLVACDVYRPAAIDQLHVVGEQIGVEVFSDRGNNDPVAISKAAIAHAKA
NGFNVVIIDTAGRLAVDEAMMTEISNIHKAIQPQETLFVVDAMTGQDAVNTAKAFNDTLN
FDGVILTKLDGDTRGGAAISIKTVVNKPIKFIGTGEKMEAIDVFHPSRMAERILGMGDVV
SLVERAQEQFDEVEARKLQKKIAKNQFGFDDFLSQIQQIKKMGNMKDLVGMIPGAGKMMK
DVDIDDDAFKGIEAIIHSMTPKERSNPSIINASRKKRIGKGSGTSVQEVNQLLKQFNQMS
KMMKMMQGGGGKKMMQMMQGLK
NT seq 1329 nt   +upstreamnt  +downstreamnt
atgtttaataatttaagcgataaattagataaagccttacacgttcttaaagggcatgga
agtatcacagaagttaatgttgccgaaacactaaaagaagttcgtcgcgctttattagat
gccgatgttaactttaaaatagcaaaagattttaccaatagagtaaaagaaaaagcttta
ggtgctaacgtattaacaacacttcagccagggcaactcatggttaaaattgttaaagac
gagcttaccgaacttatgggtggcgaagcagaaggcattaatctttctggcaatccaacc
gttattttaatgtctggtttacaaggttctggtaaaactacgttttctggtaaattggct
aattatcttaaaaataaaaaaacaaaaaaaccacttttagtagcttgcgacgtgtatcgt
cctgctgctatcgatcaattacacgtagtaggtgaacagataggagtagaggtttttagt
gaccgaggaaacaacgaccctgtcgcgatttcgaaagctgcaattgcacacgccaaagca
aatggatttaatgtggttattatcgataccgctggtcgtttagctgtagatgaggcgatg
atgaccgagatttcgaatattcataaagccattcagcctcaagaaaccctatttgttgtc
gatgccatgactgggcaagatgctgtaaatacggcaaaagcctttaacgatactctaaat
tttgatggtgttattctaacaaaattagatggtgatactcgtggtggtgccgctatttct
attaaaacggtggttaataaaccaataaagtttattggtactggcgagaaaatggaagct
atcgatgtgtttcacccttcacgtatggccgaaagaattctcggtatgggtgatgtggta
tcgttagtagaaagagcgcaagaacaatttgatgaggttgaagcaagaaaacttcagaaa
aaaattgctaagaatcagtttggatttgatgacttcttaagtcaaatacagcaaatcaag
aaaatggggaacatgaaagaccttgttggcatgattccaggcgctggaaaaatgatgaaa
gatgtggatattgatgatgatgcttttaaaggaattgaagctattattcattccatgacc
ccaaaagaaaggtcgaacccatctattataaatgcaagccgaaaaaaacgtattggtaag
ggctctggtacttctgtacaagaagtaaatcagttattaaagcagtttaaccaaatgagt
aaaatgatgaagatgatgcaaggtggtggcggtaaaaagatgatgcagatgatgcagggc
ttgaagtaa

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