KEGG   Oceanimonas sp. AH20CE76: N2M06_05225
Entry
N2M06_05225       CDS       T11528                                 
Name
(GenBank) 3'-5' exonuclease
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
ocj  Oceanimonas sp. AH20CE76
Pathway
ocj03030  DNA replication
ocj03430  Mismatch repair
ocj03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:ocj00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    N2M06_05225
   03430 Mismatch repair
    N2M06_05225
   03440 Homologous recombination
    N2M06_05225
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ocj03032]
    N2M06_05225
   03400 DNA repair and recombination proteins [BR:ocj03400]
    N2M06_05225
Enzymes [BR:ocj01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     N2M06_05225
DNA replication proteins [BR:ocj03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     N2M06_05225
DNA repair and recombination proteins [BR:ocj03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     N2M06_05225
SSDB
Motif
Pfam: RNase_T Rv2179c-like RNase_H_2
Other DBs
NCBI-ProteinID: XAU84420
LinkDB
Position
1075426..1076157
AA seq 243 aa
MMYLRPSSLVDTASAPDWPALFEERARSARDYRLQRFYRAGLPGPDTPLADVPFVALDFE
TTGLDARKDAIVSIGVVPFDLQRIYCRASAHWIVNPHRPMAGNTVAIHGITHSEIEEAPD
LLQVLDELLNALAGRIVVVHYRRIEQIFFAAALKARLYEDIRFPVIDTMELETRFHPRQL
SLWSRLRGRKPVSIRLANSRERYNLPHYSPHHALTDALATAELLLAQIAHHYTPETPLSE
LWL
NT seq 732 nt   +upstreamnt  +downstreamnt
atgatgtatctcagaccgtcatcattggtcgacaccgccagtgcacccgactggccggcg
ttgtttgaagagcgtgcccgcagcgcccgtgactaccggctgcagcgcttttaccgggct
ggcctgccgggtccggacacgccgctggcagacgtgccttttgtggcgctggactttgaa
accaccggactggatgccagaaaagacgccattgtcagcataggggtggtgcctttcgat
ctgcagcgcatttactgtcgcgcatctgctcactggattgtcaacccgcaccggccaatg
gcgggtaataccgtggccattcacggtattacccattcggaaatagaggaagcgccggac
ttgttacaggtgctggatgaactgctcaacgccctggccgggcgtattgtggtggtgcac
taccggcgcatagagcagattttctttgccgctgccttgaaggcgaggctatatgaggat
attcgctttccggtgatcgataccatggagctggaaacccgctttcaccctcgtcagctc
agcctgtggagccggttgcgggggcgcaagccggtatccattcgtctggccaacagccgt
gagcgctataatctgccccattattcgccccaccatgctttaaccgatgccctggccacc
gccgaactgttgctggcacaaattgcccatcactatacgccggagacgccgttaagtgag
ttatggctttaa

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