Oceanimonas sp. AH20CE76: N2M06_05225
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Entry
N2M06_05225 CDS
T11528
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
ocj Oceanimonas sp. AH20CE76
Pathway
ocj03030
DNA replication
ocj03430
Mismatch repair
ocj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ocj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
N2M06_05225
03430 Mismatch repair
N2M06_05225
03440 Homologous recombination
N2M06_05225
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ocj03032
]
N2M06_05225
03400 DNA repair and recombination proteins [BR:
ocj03400
]
N2M06_05225
Enzymes [BR:
ocj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
N2M06_05225
DNA replication proteins [BR:
ocj03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
N2M06_05225
DNA repair and recombination proteins [BR:
ocj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
N2M06_05225
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
XAU84420
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All DBs
Position
1075426..1076157
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AA seq
243 aa
AA seq
DB search
MMYLRPSSLVDTASAPDWPALFEERARSARDYRLQRFYRAGLPGPDTPLADVPFVALDFE
TTGLDARKDAIVSIGVVPFDLQRIYCRASAHWIVNPHRPMAGNTVAIHGITHSEIEEAPD
LLQVLDELLNALAGRIVVVHYRRIEQIFFAAALKARLYEDIRFPVIDTMELETRFHPRQL
SLWSRLRGRKPVSIRLANSRERYNLPHYSPHHALTDALATAELLLAQIAHHYTPETPLSE
LWL
NT seq
732 nt
NT seq
+upstream
nt +downstream
nt
atgatgtatctcagaccgtcatcattggtcgacaccgccagtgcacccgactggccggcg
ttgtttgaagagcgtgcccgcagcgcccgtgactaccggctgcagcgcttttaccgggct
ggcctgccgggtccggacacgccgctggcagacgtgccttttgtggcgctggactttgaa
accaccggactggatgccagaaaagacgccattgtcagcataggggtggtgcctttcgat
ctgcagcgcatttactgtcgcgcatctgctcactggattgtcaacccgcaccggccaatg
gcgggtaataccgtggccattcacggtattacccattcggaaatagaggaagcgccggac
ttgttacaggtgctggatgaactgctcaacgccctggccgggcgtattgtggtggtgcac
taccggcgcatagagcagattttctttgccgctgccttgaaggcgaggctatatgaggat
attcgctttccggtgatcgataccatggagctggaaacccgctttcaccctcgtcagctc
agcctgtggagccggttgcgggggcgcaagccggtatccattcgtctggccaacagccgt
gagcgctataatctgccccattattcgccccaccatgctttaaccgatgccctggccacc
gccgaactgttgctggcacaaattgcccatcactatacgccggagacgccgttaagtgag
ttatggctttaa
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