Oceanispirochaeta crateris: EXM22_00990
Help
Entry
EXM22_00990 CDS
T06177
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
ock
Oceanispirochaeta crateris
Pathway
ock03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ock00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EXM22_00990
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ock03019
]
EXM22_00990
03400 DNA repair and recombination proteins [BR:
ock03400
]
EXM22_00990
Enzymes [BR:
ock01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
EXM22_00990
Messenger RNA biogenesis [BR:
ock03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
EXM22_00990
DNA repair and recombination proteins [BR:
ock03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
EXM22_00990
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C
DEAD
RecQ_Zn_bind
ResIII
RQC
Helicase_C_2
SNF2-rel_dom
DUF6865
Motif
Other DBs
NCBI-ProteinID:
QEN06632
UniProt:
A0A5C1QKH4
LinkDB
All DBs
Position
complement(226247..227689)
Genome browser
AA seq
480 aa
AA seq
DB search
MYMTPDPLTQTAKERFDISYLFPYQHLVITNILRSSGYFGEEEQEEAPRNQVVLLPTGAG
KSLCFMLPACLLEGLTIVVFPLLGLMADQLRRVEEAGMKGALLKGGMSQSEKAKIWSSVE
DGSLNMLLTNPEILILPEVREKLKKVNIAHLVLDEAHTIPEWGETFRPACLKLGEVLPEL
AAQQITAYTATASPQILEKIKSILFSEVDFNLVMANPDRVNIHYEVLPVLSRMQTLTELI
PRIDRPAIIFCSSRRQTEQCALYLRQRLDDQEIRFYHAGLSKELRTDLENWYFRSENGIL
AATCAYGLGMDKPNIRTVIHYTLPSSVEAYLQESGRAGRDRQPCRAILLYHPSDRLREAE
NPREDLRERYEKLLTFAEDSETCRRESLLAILEAVPEDCNSCDVCRGKVITVDPTEKTII
DLAQKYSKRFTKKLLKDFLLGRFSHEIRQAYWYRAKGFGILKKWNPDDVQEAIRVLELGL
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atgtatatgactcccgatccacttacccaaacagcaaaagaacgcttcgatattagctac
ctcttcccctaccagcatctggtcatcacaaacatactcagaagctctggttacttcgga
gaggaggaacaggaggaagccccccgaaatcaggtggtactactccccacgggggccgga
aaaagcctctgtttcatgctaccggcctgcttgctggaggggctgacaatcgttgtcttt
ccccttctgggactgatggcggatcagctgcggagggtagaggaagccgggatgaaagga
gcactcctcaaaggtgggatgagccagtccgaaaaagcgaagatttggtcctctgtagaa
gatggatccctcaatatgctcttaacaaacccggaaatactgatcctaccggaagtcaga
gagaaactcaaaaaagtgaatatagcccatctggttctggatgaggctcataccattcct
gaatggggagagacctttcgaccggcctgtttgaaactgggagaagtgctgcccgaactg
gcagctcagcaaataacagcctatacggccacagcgtctcctcagattctagaaaaaata
aaatctattctttttagcgaagtggatttcaatctggtgatggccaatcctgaccgtgtg
aatattcactatgaggttttgcctgtcctgtcacgaatgcaaacactgacagaacttatt
ccacgcatcgatcgcccggctatcatcttctgctccagccgaagacaaaccgaacagtgt
gccctctacctcagacagagactggatgatcaggagatccgtttttaccatgcaggactc
tccaaggaactaaggactgaccttgaaaattggtattttagatctgagaatgggattctg
gctgccacatgtgcctacggtttgggtatggacaagccaaatatccggactgtgattcat
tacaccctcccctcttcggtggaggcctatctgcaggaatctggacgggccggccgtgac
aggcaaccctgccgggccatccttttataccatccatcagaccgtctccgtgaggcggag
aatccaagagaagatttaagagagcgctatgaaaaactactgacttttgcagaagactca
gaaacatgccgccgggaatccctccttgccatcctggaagcggtaccagaagattgtaac
agttgtgatgtgtgcagggggaaggtcattacagttgatcctacagaaaagaccataatc
gatttagcacaaaaatattccaaaaggttcacaaaaaaattgctcaaagattttttactg
ggccggttcagtcatgaaatacggcaggcatactggtacagggcgaagggtttcggtatc
ctgaaaaagtggaatcccgatgatgtacaagaggctattcgtgttcttgagttaggctta
taa
DBGET
integrated database retrieval system
