Oceanispirochaeta crateris: EXM22_02220
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Entry
EXM22_02220 CDS
T06177
Name
(GenBank) DHH family phosphoesterase
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
ock
Oceanispirochaeta crateris
Pathway
ock03410
Base excision repair
ock03430
Mismatch repair
ock03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ock00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
EXM22_02220
03430 Mismatch repair
EXM22_02220
03440 Homologous recombination
EXM22_02220
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ock03400
]
EXM22_02220
DNA repair and recombination proteins [BR:
ock03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
EXM22_02220
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
EXM22_02220
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
EXM22_02220
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
DHH
DUF3369
DUF3289
Motif
Other DBs
NCBI-ProteinID:
QEN06864
UniProt:
A0A5C1QJT2
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All DBs
Position
complement(486938..488167)
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AA seq
409 aa
AA seq
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MVEDLTQAMEQAISALIDSKFRKVTLLHHNDTDGLCAGTILLQALESMGWEVSRYSLEKP
YPEVLNKIFTVQNQVIIFTDFAGKIAPLISRLNAGRNLVIILDHHPAERVSDESVFNMDG
ELYDLKGDRDISASATCTLFARALLQRFDSKESYSPHLGVLGAVGDGFLVKGCLSGVNRD
ILKIAREQNLIRVEESETGETYFIKLGNTEYAALEICTILDTIGGVGYYSDGPSLGIEIC
KNGLNPNIASYMNQLLEEKDLIFDREIQNLQKNIRTTDHLQWFNVEDRFRPMGVKMIGVF
CTQIKDEPFLDPTKYLAGFQNVPDMVPGFGEINFDSSKISMRVSKELTEKIRKGEIPGLN
TFLPEATTRLGGFSDACHGLSAATTVKIGQEEMLINEMENVLHKKDGKS
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atggttgaagatttaacacaagcaatggaacaggccatttctgctttgattgattcaaag
ttccggaaagtgacccttttgcatcacaatgatacagacggactgtgtgcggggacgatc
ctgctgcaggctcttgaaagcatgggctgggaagtctcgcgttattcgcttgaaaaaccc
taccctgaggtcttgaacaagatcttcaccgtacagaatcaagtcattattttcactgat
tttgctggtaagatagccccattgatttccaggttaaacgccggaagaaatctagtcatc
attctggatcatcatccggctgagagagtaagtgatgaatctgtattcaacatggatggt
gagttatatgacttgaaaggcgaccgtgatatctctgcatcggccacctgcaccctcttt
gcgcgggctctgctacaaagatttgactcaaaagagtcttactctccacaccttggagtg
cttggagctgttggagatggatttctggtaaaaggatgtctttccggagtaaacagagat
attttaaaaattgcaagagaacagaatctgattcgtgttgaagaatctgaaactggagag
acatactttattaaactaggaaatacagagtatgcggctctggaaatctgcaccatttta
gatacgattggaggtgttggatactacagtgacggtccctccttaggcattgaaatatgt
aaaaatggcttaaatcccaatattgcatcctatatgaatcaactgttagaagaaaaagat
ttgatatttgatagggaaattcagaatttgcagaaaaatatcagaacaactgaccatcta
caatggttcaatgttgaggatagattcaggccgatgggagtaaagatgatcggggtcttt
tgtacacagataaaagatgagcctttcctcgatccaactaaatatcttgcaggatttcaa
aatgttcccgatatggttccaggtttcggtgaaatcaacttcgattcatccaagatatca
atgcgggtttcaaaagaattgacagaaaagatcagaaaaggagaaatccctggtttaaat
accttcctccccgaagccacaacgaggcttggcggtttctccgatgcctgccacggactt
tcagccgccacaacagtcaaaatagggcaagaagaaatgctaataaatgaaatggagaat
gttcttcataaaaaggatggaaaatcatga
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