Oceanispirochaeta crateris: EXM22_02925
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Entry
EXM22_02925 CDS
T06177
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
ock
Oceanispirochaeta crateris
Pathway
ock00521
Streptomycin biosynthesis
ock00523
Polyketide sugar unit biosynthesis
ock00525
Acarbose and validamycin biosynthesis
ock00541
Biosynthesis of various nucleotide sugars
ock01100
Metabolic pathways
ock01110
Biosynthesis of secondary metabolites
ock01250
Biosynthesis of nucleotide sugars
Module
ock_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
ock00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
EXM22_02925 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
EXM22_02925 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
EXM22_02925 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
EXM22_02925 (rfbB)
00525 Acarbose and validamycin biosynthesis
EXM22_02925 (rfbB)
Enzymes [BR:
ock01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
EXM22_02925 (rfbB)
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Motif
Pfam:
GDP_Man_Dehyd
Epimerase
3Beta_HSD
NAD_binding_4
Polysacc_synt_2
RmlD_sub_bind
Motif
Other DBs
NCBI-ProteinID:
QEN06987
UniProt:
A0A5C1QHJ8
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Position
636489..637568
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AA seq
359 aa
AA seq
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MTSSRTFKNILVTGGAGFIGSNFIRVLLNNKEFTGRVINLDKLTYAGNASSLDDVAARFP
DRYDFKQGDICDAELVSSLFQSYQIDAVCHLAAESHVDRSIEGPEAFIKTNVNGTFTLLD
TARKAWTGQFENKLFHHVSTDEVYGSLGDTGYFFEDTSYDPRSPYSASKASSDHLVMAYF
HTYGLPITMTNCSNNYGPYQFPEKLIPVMIENMLLGKALPVYGDGKNIRDWLYVEDHNSA
VWTVMQKGRLGETYNIGGENEWENIKLVNTLCEVVATEAGLDVSSLKGLISYVKDRPGHD
QRYAINCDKLKSELGWTQSLNFEEGLRKTVRWYLENRAWIENIKSGEYRKWMEKNYSQR
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
atgacatcatctagaacattcaaaaatatacttgtcaccggcggtgcgggttttataggc
agtaactttatccgggttcttttaaacaataaggagtttaccggccgggttatcaatctg
gataaattgacctatgccggtaatgcttcctcattggatgatgtagctgcccgcttccct
gatcgttatgactttaaacagggcgatatctgtgatgcagagcttgtatcttcgttgttt
caatcctatcaaattgacgccgtttgtcatctcgctgccgagagccatgtggatcgctcc
attgaagggccggaagcatttattaagaccaatgtgaatggtacttttacccttctggat
acggcgagaaaagcctggaccggtcaatttgaaaataagctgttccaccatgtgtccaca
gatgaagtatatggctcactgggagacacaggatacttctttgaagatacttcctatgat
ccccgtagtccctattctgcatccaaagcatcatcagaccatttggtcatggcttatttt
cacacctacggactacctatcaccatgacaaattgttccaataattatggaccttaccaa
ttccctgaaaaattaatccctgtgatgattgagaatatgcttctggggaaggctcttcca
gtttatggggatggcaaaaacatccgggactggctctatgtagaagatcataattcggct
gtctggactgttatgcagaaaggccggttgggagaaacctataacatcggtggtgagaac
gagtgggaaaatatcaagcttgtaaacaccctttgtgaagttgtcgcgacagaagcagga
ttggatgtatcttcattgaaaggcttgatttcttatgtgaaagaccgtcccggacacgat
cagaggtatgccattaactgtgacaaactaaaatcagagttaggttggacccagtctttg
aattttgaagaaggtcttcgtaaaactgtccgttggtatctggaaaatagagcctggatt
gagaatatcaagtctggagagtatcgtaagtggatggaaaaaaattattctcaaagatga
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