Oceanispirochaeta crateris: EXM22_03190
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Entry
EXM22_03190 CDS
T06177
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
ock
Oceanispirochaeta crateris
Brite
KEGG Orthology (KO) [BR:
ock00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ock03032
]
EXM22_03190 (topA)
03400 DNA repair and recombination proteins [BR:
ock03400
]
EXM22_03190 (topA)
Enzymes [BR:
ock01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
EXM22_03190 (topA)
DNA replication proteins [BR:
ock03032
]
Prokaryotic type
DNA Topoisomerases
EXM22_03190 (topA)
DNA repair and recombination proteins [BR:
ock03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
EXM22_03190 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Zn_ribbon_recom
zf_C2H2_13
Zn_ribbon_PaaD
Toprim_4
Zn_ribbon_8
Zn_ribbon_LysW
Motif
Other DBs
NCBI-ProteinID:
QEN07038
UniProt:
A0A5C1QIB0
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All DBs
Position
699757..702135
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AA seq
792 aa
AA seq
DB search
MAATKKLLIVESPAKAKTIKKILGKDFTVKASVGHIRDLNSSGRGKKALGIDIEHDYKPD
YIIIKGKEKTVRELQEAAAKADEVYLAPDPDREGEAIAWHLKEALNLSDENAHRVTYSAI
TKRAVLQALEEPRKIDMDRVNAQQGRRILDRLVGFSLSPFLWKKVAKNLSAGRVQSVAVR
IVVEREREIKAFIPEEFWRIKALVSPPEAKKDQFEASLVRWQGEKFELGKPAASSEAASA
VVADHVKNHPFKIRKIETREAKGRPSPPYITSTLQQGASTYLSFGTTKTMSVAQKLYEGM
EIDGTTQGLITYMRTDSTRIAPEALEEVREYISKNFDPEYLPEKPQEYSTKKNAQDAHEA
IRPSSVELTPEKVKPFLTRDQYRLYELIWRRFVASQMPPARYDITTVTIESGDAELEAKG
RIVRFKGHSILIPESEKKEDSKYQNLPDVKEQDLLDLDDLDVTQNFTKPPSRYSEASLVK
ALEKEGIGRPSTYAPIIKTINDRGYVRLESRAFHATELGMAVNDILIQNFEDIMDLKFTA
GMEDSLDEVEQGHKDWVALIDQFYKPFDQKLEKALKDAEALKGRPWDGDEKCPLCGSSLV
VRYSVNGAFLGCSTYPECKGLIPMPGEDEGDENGEPAEIIPCPECGSNMVKKKSRYGKEF
MACSRYPECKTTLSLDKEGKPVELPKIERDCDECGKPMEVKMGRRGPFLACSGYPDCKNT
MPIDKDGNVVILPKVEGEVCEKCGKPMEVKLGRRGPFLACTGFPKCRNAKPLPGDEKPAK
KKKEADKESDKE
NT seq
2379 nt
NT seq
+upstream
nt +downstream
nt
ttggcagcaactaaaaagcttttgatcgtggaaagccccgcaaaagcaaaaacaattaaa
aaaattctcggcaaagattttactgtcaaagcctcggtgggacatatccgcgacctgaac
agcagtggccgcggtaagaaagctttgggaattgatatagagcatgattacaagccggac
tacatcatcatcaagggaaaggaaaaaactgtccgggaactgcaagaggcggccgcaaaa
gcggatgaggtctatctggctcccgacccagaccgcgagggtgaagccattgcctggcat
ctaaaagaagctctcaatctcagtgatgaaaatgctcaccgggtgacctattcggctatc
actaagcgggctgtacttcaggctcttgaagaaccccgcaaaattgatatggatagagtc
aatgcccagcagggcaggagaatcctggatagattggtgggattcagtctctcccccttc
ctttggaaaaaagtggccaaaaatctcagtgcaggacgcgttcagtccgtagccgttcgc
atcgttgtagaacgggagagagagatcaaggccttcatacccgaagaattctggagaatc
aaagccctcgtttctccgcctgaagcaaaaaaagatcaatttgaagcctccctcgttcgc
tggcagggagaaaaattcgaactgggtaaacccgcagcttcctcagaagctgcctcggcg
gtggttgcagaccatgtgaaaaatcacccttttaagattcgtaaaattgagaccagggaa
gccaaaggccggcccagtcctccttatatcacctccaccctgcagcagggggccagtacc
tatctgagtttcggtacaaccaagactatgtctgtggcacagaagctctacgaaggtatg
gagattgacggcaccactcagggtctgattacttacatgagaacggactcaacccggatt
gctcccgaggctctggaagaggtgagagagtatatctccaagaattttgaccctgaatat
cttcctgagaagcctcaggaatattcgactaaaaagaacgcccaggatgctcatgaagcg
atccgtcccagttctgtagaactgacccccgaaaaggtaaaaccctttctgacacgggac
cagtacaggctatatgagctgatatggcggcgctttgttgcatcacagatgccacctgcc
cgttatgacatcacaacggtgaccatcgagtcgggagacgccgagctggaagccaaaggc
cgtatcgtccggtttaaggggcacagcatcctgattcccgagagcgaaaagaaagaagac
agcaaatatcagaatcttcccgatgtgaaagaacaggatcttttggacctcgatgatttg
gatgtgactcagaattttaccaaaccaccttcccgttattccgaggccagtctggtcaag
gctcttgaaaaagaaggcattggccgtccatctacctatgctcctatcataaaaacaatc
aatgacagaggatatgtccgactggagagccgggcgttccatgccaccgagcttggtatg
gccgttaatgatattctgattcagaattttgaagacatcatggatctgaagttcaccgcc
gggatggaagactctctggatgaggtggagcaggggcataaagactgggttgccctgatc
gatcagttctataaaccctttgatcagaaactggaaaaggcactcaaggatgcggaggct
cttaagggtcgtccctgggacggagatgaaaaatgccccctttgcggcagctccctggtt
gtccgctattccgtaaatggtgcctttttgggttgttccacctatcctgaatgcaagggg
ctcatccccatgccaggagaagacgaaggtgatgaaaatggagaaccagcagagatcatt
ccctgccccgaatgcggcagcaatatggttaagaaaaagtcccggtacggtaaggagttt
atggcctgttcccgttacccagagtgtaagaccaccctttctctggacaaagaggggaaa
cctgtagaactgcctaaaattgaacgggactgtgatgaatgcggtaagcctatggaagtg
aaaatgggtcgtagaggaccatttttggcctgttctggatatccggactgtaaaaacaca
atgcccatagacaaagacggcaacgtggttattctcccaaaggttgagggggaagtctgc
gaaaagtgtggaaaacccatggaagttaaactgggccgtcgtggacccttcctggcttgt
accgggtttccgaaatgcaggaatgccaaaccccttcccggagatgaaaaaccagcgaag
aaaaaaaaagaagctgataaagaaagtgataaagagtag
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