Oceanispirochaeta crateris: EXM22_04565
Help
Entry
EXM22_04565 CDS
T06177
Name
(GenBank) class I SAM-dependent RNA methyltransferase
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
ock
Oceanispirochaeta crateris
Brite
KEGG Orthology (KO) [BR:
ock00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ock03009
]
EXM22_04565
Enzymes [BR:
ock01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
EXM22_04565
Ribosome biogenesis [BR:
ock03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
EXM22_04565
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
MTS
TRM5-TYW2_MTfase
Methyltransf_25
Methyltransf_15
Cons_hypoth95
Motif
Other DBs
NCBI-ProteinID:
QEN07296
UniProt:
A0A5C1QL84
LinkDB
All DBs
Position
1004918..1006072
Genome browser
AA seq
384 aa
AA seq
DB search
MDKMKSQNSVSISRNSNIYHDVQVEKIIPGGDGLVRMKGKVIFIPGVIGGEIIDFKIVSE
GKKFSRGSVIRIKESSENRVLPFCPVYEICGGCNMQHLSYEYQISLKESFVKEHFKRLAG
IGLPENFKFLPSKPQHYRNRIQLHRGEEGCGFKMRSSDDVIPLTHCPVLVDSLNDFLSAK
ENIVGTKETFYGLEERYYRESGQEDIRVLIGDHPVHFRADLFFQSNLSLIPELLNFSLNG
YKGQHGMDLYCGVGLFSVFMKERFSEITAIELNPKTEMYYRKNMAGASYHYFAMSLEDWV
KKKSGPPADLIVVDPPRTGLSAKVRSHILKMNVPDLVYVSCDPVTQARDTKDLLEGGYEI
SAARGFDFYPQTAHMETVLRFRKR
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
atggataaaatgaaaagtcagaattcagtttctatatcgcggaattcaaatatatatcac
gatgtacaggtcgaaaaaattattccgggcggtgacggtctcgtcagaatgaagggaaaa
gtcatatttattccaggagtgatcggcggagaaattatcgattttaaaatcgtcagcgaa
gggaaaaaattttcccggggttcggtcatccgcattaaggagagttccgaaaacagagtc
ttaccgttttgccccgtttacgagatttgcggcggttgcaatatgcagcatttgtcttac
gaataccaaatcagtttgaaggaatcttttgtcaaagaacactttaaaaggcttgctggt
ataggtttaccagaaaacttcaaattccttccttccaaaccccaacactatagaaacaga
attcagctccatagaggagaggagggctgtggctttaaaatgcgttcctctgatgatgtc
attcccctgacacattgtcctgtcctggtagactccctcaacgattttctttcagctaaa
gaaaatattgttggcactaaggaaactttttatggcctggaagagcgctattatcgtgag
tcgggtcaggaggatattcgggttctcataggggatcatcctgttcatttcagagcagat
cttttttttcagagtaatttgtctctcataccggaactcctgaatttcagccttaatgga
tataaaggacagcacggaatggatttatattgcggggtgggactcttttctgtttttatg
aaagagcgtttctctgagataacagccatcgaattgaacccgaaaacagagatgtattac
aggaagaatatggccggtgcttcctaccactattttgccatgtccctggaagactgggtc
aaaaaaaagtcaggtcctccggcggacctgattgttgtggatcctccccgtacgggactc
tctgccaaggtgagatcccacattctgaagatgaatgtacccgatcttgtgtatgtctcc
tgtgaccctgtaacgcaagcccgggatacaaaagacctcctagagggagggtatgaaatc
agcgctgccagaggatttgacttttatccccagacggcccatatggaaacggtcctcagg
ttcaggaaaagatga
DBGET
integrated database retrieval system
