KEGG   Oceanispirochaeta crateris: EXM22_06050
Entry
EXM22_06050       CDS       T06177                                 
Name
(GenBank) GAF domain-containing protein
  KO
K02584  Nif-specific regulatory protein
Organism
ock  Oceanispirochaeta crateris
Pathway
ock02020  Two-component system
Brite
KEGG Orthology (KO) [BR:ock00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    EXM22_06050
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:ock03000]
    EXM22_06050
Transcription factors [BR:ock03000]
 Prokaryotic type
  Helix-turn-helix
   Other families
    EXM22_06050
SSDB
Motif
Pfam: Sigma54_activat Sigma54_activ_2 GAF_2 GAF GAF_3 AAA_5 AAA AAA_2 HTH_8 AAA_16 DUF3369 AAA_7 Mg_chelatase GIP1_N HTH_3 HTH_28
Other DBs
NCBI-ProteinID: QEN07569
UniProt: A0A5C1QK55
LinkDB
Position
complement(1326023..1327531)
AA seq 502 aa
MVADKVDRKRLDTLIEINNLINSNYTDVRVLMTHILESSTRLTGGESSSLLLLDTETDLL
YFEIALGTKSEEVRKFTVKMGEGIAGWVAQNNTSLIVNDVENDPRFFSEIDKDVGYKTTS
ILAVPLRMKDQCVGVIEVINKENGSNFTEEDLEWLEIFTNQASLAYQNAQSFKKVKDELF
RLQDRVESDSGFHKMIFKSSEIEQLLGITDKISKSDSPVLITGESGVGKELFAEQVHLRS
PRSKETFVRLNCAAIPEELLESELFGHVKGAFTDASNERLGRFSLADGGTIFLDEIGEIS
LNVQAKLLRVLQNKQFEPLGSSDTIMVDVRIIAATNRNLESMVDKGSFREDLYYRLNVLP
VNIPALRDRADDIEVLSDYFLSKYSARNRKDIKGISPEARELLFSYSWPGNVRELENVIE
RAVIVSKVSLIDTEDLLLSREKERSMPGYKGKSLKEAVNIFKKNYIKRVLGNCNNNQTET
AAKLGIQRTYLSRLMKDLEIKV
NT seq 1509 nt   +upstreamnt  +downstreamnt
atggttgctgacaaagttgatcgaaaaagactggatacactgattgagattaataatctt
attaactcaaattatacagatgtccgcgttcttatgactcatatccttgaatcgtcgact
cgcctcaccgggggcgagtcttcttctcttcttttacttgatacagaaacagaccttcta
tattttgaaatagctctgggaacaaagagtgaggaagttcggaaattcactgtaaaaatg
ggggagggcatagccggatgggtcgcccagaataatacatccctcattgtgaatgatgtt
gaaaatgatcctcgttttttttccgaaattgataaagatgttggttataaaacaacctca
attcttgctgtccctttaaggatgaaagatcagtgcgttggagtcatagaagtcatcaac
aaagagaatggaagcaactttacagaagaggatcttgaatggttggaaatatttaccaat
caggcatctttagcatatcagaatgcccaatcatttaaaaaggtcaaagatgaactgttt
cgccttcaggatcgtgtagagtctgatagcgggtttcataagatgatttttaaaagtagt
gagatagagcaacttttaggaattacggataagatttcaaaatcagactcgcctgtttta
ataacaggagagagtggtgtaggtaaagaactttttgccgaacaggtccatttgaggagt
ccccggagtaaagaaacatttgttaggctcaattgtgcagccattccagaagaattgctt
gaaagtgagctattcggtcatgttaagggtgcatttacagatgcttccaatgaacgatta
ggtcgtttttcactggcagatggtgggacaatttttctggatgagattggggaaattagt
ctgaatgttcaggctaaactgttgagagttctccagaataaacaatttgaacccctgggg
tcatctgacaccatcatggttgatgtcaggattatcgctgctaccaacagaaatcttgaa
agcatggtagacaagggctcttttagagaagacctttactacagactcaatgtgctacct
gtgaatataccggctctaagagaccgggcggatgatattgaagtccttagcgattatttt
ctgagtaagtattcggccaggaacaggaaggatatcaaaggtatttcgccggaagcaaga
gagttgctattttcctacagttggcccggcaatgtgagagaacttgaaaatgtaattgaa
agagcggtcattgtctctaaggtatcccttattgatacggaggatcttctcctatcaaga
gaaaaagagcgttctatgccgggatataaaggaaaaagcctgaaagaggcagtgaatata
tttaaaaaaaattatataaaaagagtactcggtaactgtaataataatcagaccgagaca
gctgcgaagttgggtatacagagaacttacttgtccagactaatgaaggatctggagatt
aaagtatag

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