Oceanispirochaeta crateris: EXM22_06475
Help
Entry
EXM22_06475 CDS
T06177
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
ock
Oceanispirochaeta crateris
Brite
KEGG Orthology (KO) [BR:
ock00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ock03016
]
EXM22_06475 (truB)
Enzymes [BR:
ock01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
EXM22_06475 (truB)
Transfer RNA biogenesis [BR:
ock03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
EXM22_06475 (truB)
Prokaryotic type
EXM22_06475 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
QEN07650
UniProt:
A0A5C1QL25
LinkDB
All DBs
Position
complement(1422234..1423163)
Genome browser
AA seq
309 aa
AA seq
DB search
MINQKNQNLKTKSLSHQSGGGIILLHKQPGLTSFQALGQLKRVLGTRKVGHTGTLDKFAE
GLLIILTGKLTRLNSIITDMDKSYEALIRFGSETDTLDPEGEVIDRAPIPGLDVIQSKLD
QFKGVISQVPPQYSAIHIDGKRAHALARSGQNVKMPSRKITIYDLEILEYNAPDLRLKVH
CSKGTYIRSLARDLARACGSRGYVQELIRTSVGPFALSEALKVDDFRGKEDFYPWEKFFE
TLGNSVSVYLSDDGLQKVEHGVPFKENFLISPLKAEADFILLKSQDDILKAVLEKKDGAY
HYKINLAAS
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atgataaatcaaaagaatcagaatcttaaaactaagtccctctcccatcagagtggaggg
ggaatcattttacttcataaacagcccggtcttacctcatttcaggctctaggtcaactt
aaaagggtcttaggtacgagaaaggtggggcacacagggactctagataaatttgcagaa
gggttactcatcattctgacagggaagttgacccgtttgaattcaatcatcacagatatg
gataagtcttatgaggctttgatccgttttggaagtgaaacggataccctcgatcctgaa
ggggaagttatcgatagggctcctattcctggtctggatgtgattcaatcaaagctggat
cagttcaagggtgttatttctcaggttccaccccagtattctgctattcatattgatggt
aaaagagcccatgctcttgcaagaagtggacagaatgttaagatgcccagccgtaaaata
acaatttatgatcttgagatattagagtacaatgcaccggatttgagattgaaagtccat
tgttcaaagggaacatatattcggtctttggctagagatctagcccgggcctgtgggagc
cgcggatatgttcaggaattgattagaacatccgttggcccttttgctctctctgaagct
cttaaagttgatgatttcaggggtaaagaggatttttatccctgggaaaagttttttgag
actttagggaactctgtatctgtctatttgagcgatgatggtcttcagaaagtggaacat
ggagtgccctttaaggaaaattttctgatttctcctttgaaggccgaggcagattttatt
cttttgaagagtcaggatgatatattaaaggccgtccttgaaaagaaggatggagcgtat
cactataaaatcaatttggcagcaagttga
DBGET
integrated database retrieval system
