Oceanispirochaeta crateris: EXM22_06890
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Entry
EXM22_06890 CDS
T06177
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
ock
Oceanispirochaeta crateris
Pathway
ock03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ock00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
EXM22_06890 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ock03400
]
EXM22_06890 (uvrB)
DNA repair and recombination proteins [BR:
ock03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
EXM22_06890 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
EXM22_06890 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
Helicase_C
UvrB
ResIII
UVR
DEAD
AAA_30
SWI2_SNF2
Kinesin
UB2H
UPF0730
AAA_22
NPHP3_N
DUF87
Microtub_bd
AAA_7
Motif
Other DBs
NCBI-ProteinID:
QEN07728
UniProt:
A0A5C1QK79
LinkDB
All DBs
Position
complement(1512324..1514312)
Genome browser
AA seq
662 aa
AA seq
DB search
MDKFKVVSPFDAAGDQINAINKLSEVFLEGAQRATLQGVTGSGKTFTMAKIIENLQKPTL
IISHNKTLAAQLYREFKDFFPHNAVEYFVSYYDYYQPEAYVPSRDLYIEKDSSINEEIDR
MRLSATMSLMERPDVLIVSTVSCIYGLGNPSSYKDMRIQLLKGESYNRDEIIRNLISLQY
ERNDMVLERGKFRVRGDVMELYPAYLKEAYRISFDWDEIESLRRFNPVSGEILEDLPMCT
IYPAKHFVMPEDRIVKSLKDIRAELVQQIEFFESRGQIVEAQRLKTRTEYDLEMMEEMGY
CSGIENYSRQLSGREAGERPEVLLDYFPPDFLTIVDESHVTLSQIRAMYEGDRSRKTNLV
NFGFRLPSALDNRPLVYTEFEAFKKQLLYVSATPRQEELDKSELVVEQIIRPTGLLDPII
EVRPTEGQMENLYGEIRKRIEIGERVLITTLTKRMAEDLTDYLNELGLKVNYLHSEVETI
ERVEIIRDLRLGKFDVLVGINLLREGLDIPEVSLIAIMDADKIGFLRSTTSLIQTIGRAA
RNAHGRVIMYADKESPAMAEAIRETSRRREIQKKYNEDHGITPETIIKAVQDILIRKTEQ
KKKAEEMTISVMKDNVNLLDPVQKKKLIKALEKEMLEKAKNMEFEEAAVLRDEIAELKGE
KL
NT seq
1989 nt
NT seq
+upstream
nt +downstream
nt
atggataaatttaaagttgtttctccctttgatgctgcaggtgatcagataaatgcgatc
aataagttatcggaggtttttctagagggggcacaaagagccacccttcagggggttact
ggttctggtaaaaccttcacgatggcaaaaattattgaaaatttgcagaaaccgactctc
atcatttctcataataaaaccctggcagcacagctctatagagagtttaaggactttttt
ccccataatgctgtagagtactttgtttcttactacgactactatcagccagaggcgtat
gttccttcccgggatctgtacatagagaaagactcttctataaacgaagaaattgacagg
atgcgtctttcggcaaccatgagcctgatggagcgtcccgatgttcttatagtgtccaca
gtttcgtgtatatacggactgggtaacccctcttcctataaagatatgaggattcagctc
ctcaaaggggaaagctataatcgtgatgagatcatccgaaatctcatttctctccagtat
gaacgaaatgatatggtcttggagagaggaaagttcagggtgcgcggtgatgtgatggaa
ctctacccggcctatttgaaagaagcttaccggataagctttgattgggatgaaatcgag
tccttacggcgttttaatcccgtttccggtgagattttagaagaccttcccatgtgtaca
atctatccggcaaagcattttgtgatgcccgaagaccggattgtaaagtctttgaaagat
atcagagctgaattggttcagcaaatagagttttttgagtccagaggtcagattgttgag
gctcagcgcctcaagacaagaactgaatatgatctggaaatgatggaagaaatggggtat
tgctccggaatagaaaactattcccgtcaactttctggccgtgaagctggagaacgccct
gaagtccttctagattattttccacctgactttttgactatcgtcgacgagtcccatgtc
acactctcccagatcagagccatgtatgagggggatcgctccagaaaaactaatcttgta
aattttggattccgccttccttctgccctggataacagacccctggtctatacagagttt
gaggcatttaagaaacagcttttgtatgtctctgccacgccaagacaggaggagcttgat
aagtccgaactcgttgtagagcagattatcagaccaacgggtcttctggatcctatcata
gaggtacggcccacagaggggcagatggaaaacctctatggtgaaatcagaaaaagaatc
gaaattggtgaacgtgttctcatcacaaccctgacaaaaagaatggcagaggatctgact
gattatttgaatgaattaggattgaaggtcaactatcttcattccgaagtggaaaccatt
gagcgggtagaaatcattcgtgatctgagactggggaagtttgatgtacttgtgggaatc
aatcttctccgggaagggctggatattcccgaggtttctctcattgccatcatggatgcg
gataagattggttttctccgatcaactacgtctctgatccagaccattggccgtgctgcc
agaaatgcccacgggcgggtcatcatgtatgccgacaaggaatccccggccatggccgaa
gccatcagggaaacgtcacgcaggagagaaatccaaaaaaagtataatgaagatcatggc
ataactcctgaaactataataaaagctgtacaggatatcctgatcagaaaaacagaacag
aaaaagaaagccgaagagatgacaatttctgtgatgaaggataatgttaacctccttgat
cctgttcagaagaaaaaacttataaaagcactggaaaaggaaatgctggaaaaggctaaa
aatatggaatttgaagaagcggcggttctcagagatgaaatagcagagctcaagggtgag
aaattatga
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