Oceanispirochaeta crateris: EXM22_08280
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Entry
EXM22_08280 CDS
T06177
Symbol
pcnB
Name
(GenBank) polynucleotide adenylyltransferase PcnB
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
ock
Oceanispirochaeta crateris
Pathway
ock03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ock00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EXM22_08280 (pcnB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ock03019
]
EXM22_08280 (pcnB)
Enzymes [BR:
ock01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
EXM22_08280 (pcnB)
Messenger RNA biogenesis [BR:
ock03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
EXM22_08280 (pcnB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_RNAbd
Motif
Other DBs
NCBI-ProteinID:
QEN07980
UniProt:
A0A5C1QLX6
LinkDB
All DBs
Position
complement(1803303..1804463)
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AA seq
386 aa
AA seq
DB search
MLIRYGKNSKGRLIKQAKVYTLDEHGINRGSLDRDALKVTDRLRSAGYQAYVVGGAVRDL
LIGKIPKDYDIATDAYPSKVRKIFRNSRIIGKRFRLVHVYFPQNKILEVATFRSLEGGEG
DNVYGTIDEDANRRDFTLNALYYSPREEQIIDYHDGVKDIRTKKLRSVIPLDITFKEDPV
RMLRGIKYSVMTGARIPWRLRQAIKKEAPLLAECSVSRMSEEIFKILQSGYSEAIFKRAE
ELKILEFLIPRIHDSLAKSKDGRGYRKSFYRDMQKLDKYIKKEGKDKKRGKMLYFLTHTF
LMETTSLHEETETQYSDTVNAVKEYLRPMIAPNRDVMEAVKLLFRQNQWKIPRKRPPFKG
TPSPRNKQAKQGHKPASSRRSTPASR
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atgctgataagatatggaaaaaatagcaagggccgcctcattaagcaggctaaagtatat
acacttgacgaacacggaataaaccgcgggagcctggatcgtgatgctctgaaagtcaca
gatcgtctgagatccgcaggttaccaggcctatgtcgtgggcggggctgtaagagacctc
ctcataggcaaaattccaaaagattatgatattgccaccgacgcatacccttccaaggtt
aggaagatatttagaaattcccgtatcataggaaaacgcttccgactggttcacgtctat
tttccacaaaacaagatattggaagtcgcaaccttccgttctctcgaagggggggagggc
gataatgtttatggtacaatagacgaagatgccaacagacgggattttactctcaatgcc
ctgtattattctccccgggaagagcagatcattgattatcatgatggagtcaaagatata
agaacaaaaaaactccgctccgtcattcctctggatattacgttcaaggaagatccggtt
cggatgctcagaggaattaaatactccgtaatgacaggagccaggattccctggcgtttg
aggcaggcaatcaaaaaagaggcaccgctactggccgagtgttccgtttcgaggatgtcc
gaagagatttttaagattctccagtcggggtactccgaagccatatttaagagagcagaa
gaattgaaaattctggaattccttatcccgaggattcatgattccctggcaaagagtaaa
gacggcaggggatataggaaaagcttttaccgggatatgcagaagttggataagtacata
aaaaaagaaggaaaggataaaaaaagagggaaaatgctctatttcctgacccataccttc
ctcatggagacgacctccctccatgaagaaaccgaaactcaatacagcgatacagtcaat
gccgttaaagagtacctgcgacctatgatcgctcccaaccgggatgttatggaagcagta
aagctcttgtttaggcagaatcaatggaagattcccaggaaacgaccaccttttaagggg
actccttctcccagaaacaaacaggcgaaacaaggtcataaaccagcttcgtcaagacga
tctactccagcgagtcgttag
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