Oceanispirochaeta crateris: EXM22_10835
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Entry
EXM22_10835 CDS
T06177
Name
(GenBank) DNA helicase UvrD
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ock
Oceanispirochaeta crateris
Pathway
ock03420
Nucleotide excision repair
ock03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ock00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
EXM22_10835
03430 Mismatch repair
EXM22_10835
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ock03400
]
EXM22_10835
Enzymes [BR:
ock01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
EXM22_10835
DNA repair and recombination proteins [BR:
ock03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
EXM22_10835
MMR (mismatch excision repair)
Other MMR factors
EXM22_10835
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
AAA_12
ResIII
AAA_11
PcrA_UvrD_tudor
Motif
Other DBs
NCBI-ProteinID:
QEN08456
UniProt:
A0A5C1QPF8
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All DBs
Position
complement(2387606..2389717)
Genome browser
AA seq
703 aa
AA seq
DB search
MREPEWLTSLNDEQKKAVIHEKEPLLILAGAGSGKTRVVTTRIAYLVEKLGFSPWSILAV
TFTNKAAAEMRERVESLVPGAEGAMIRTFHSFGAWLLRRNGAPLGLKSSFTIYDDDDTLG
LLKTLFEDLPRNELRLIAKNISRAKDECLSPDDDLGHISADLDFPRYYKEYEERLRSIGN
ADFGDLIYLSRLLLAENPEIRGRLQQRFRVILVDEYQDSNRAQFQLLQQLVSPGTWLCVV
GDDDQSIYRFRGAEVENILGFQDQFPGTKVIKLEENYRSTGHILAVASHVVAHNEGRLGK
NLWTRQEEGLKPCLAYLDNQNEEAEFCARQLADGNWSNSAILYRTNAQSRVFEQILRKYN
INYRLVGTLSFYSREEVKDSLAYLSFLSNPADEVAFRRIINKPSRGIGAVSLRKILKGEG
DFLLSQNLEEALKESVGKVKGKAGKGVASLIDLLDKMKELMPLQENLGQFLKELIHESGL
LDHYKQQDKVENTQRVKNLEELVTAATDYPSNSEGLAEFLELIELDQASLEEEETDTNRV
TLITMHNTKGLEFDRVFISGLEEGLFPRGAEYDDEQEIEEERRLFYVSITRARKELFLTS
CRRRMLYGRTEQASPSRFLNELPDEHVDIQGAAPSLSAGHGNLGFESEYPPGTRIYHEDY
GTGEVIRNVQNGGHLVIQVAFETGHSMTFLPEFSGYQLEKLGS
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
atgagagaaccggagtggctcacttcactcaatgatgagcagaagaaagccgtcatacat
gaaaaggagcctcttctgatactggccggtgccggctcggggaaaacccgggtggtcacc
acccgcatagcctaccttgtcgaaaaactcggattttctccctggtctatactggccgtt
acatttaccaacaaggctgcggctgaaatgagagaacgtgttgagtctctggttcccgga
gccgaaggtgccatgatcaggactttccactcttttggtgcttggctccttcgccggaat
ggagcccccttaggactgaagagcagtttcacaatctatgacgatgacgacactttaggg
cttttgaaaaccctgtttgaagatctcccccggaacgaactccgcctcatagccaaaaat
atctcacgagccaaggatgagtgtctctctcccgatgatgacttggggcatatttcggcg
gatctggatttcccaaggtattacaaggagtatgaagagcgcttgaggagtatcggcaat
gccgattttggtgacctcatatacctgtcccgccttcttctggccgagaatccggaaatt
cggggacgactgcagcagaggtttcgggtgatccttgtggatgaatatcaggactccaac
cgggctcagtttcagctgcttcagcagcttgtctctccgggaacctggctctgtgttgtg
ggagatgacgatcagtccatctaccgattcagaggggctgaagttgagaatatcctcggt
tttcaagatcagtttccaggtacaaaagtcataaagctggaagagaactatcgttctacc
gggcatattttggccgttgcttcccatgtggtggcccataatgaggggcggcttggaaag
aatctctggacccgtcaggaggaggggcttaaaccttgcctcgcctatctggataaccag
aatgaggaagccgagttctgtgcccgtcaactggccgacggcaactggtccaattcggcc
atcttgtatcgtaccaatgcccagtctcgagtctttgaacagatcctgcggaaatacaac
atcaattaccggcttgtgggaaccttgagtttctacagccgtgaagaagtaaaggattcc
ctggcctatctcagcttcttgagcaatcccgccgatgaagtggcctttagacggatcatt
aacaagccttcccgtggcatcggcgccgtttctttgaggaaaattctcaaaggagaaggg
gactttctgctttctcagaatctggaagaagccctgaaagaatccgtgggtaaggtgaag
ggaaaggcgggcaaaggtgtggcctctctaatcgatcttttggacaagatgaaagaattg
atgcctctgcaggaaaacctggggcagtttcttaaggaactcatacacgagtctggcctt
ctggatcattacaagcagcaggataaggttgaaaatacccaacgggtcaagaacctggaa
gaactcgtgacagcggctacggattatccgtccaacagtgaaggcctggctgaattttta
gaattgatagagctggatcaggcttctttggaagaggaagagaccgatacaaacagggtc
actctcatcaccatgcataatacaaaaggtctagagtttgaccgtgtctttattagcggt
ctggaggaaggtttgtttcccagaggggccgaatacgatgatgaacaagagattgaagaa
gaacggcgcctgttttatgtcagcatcacacgggcgcgcaaggagctttttctcacgtcc
tgcaggaggcgtatgctctatgggcggaccgaacaggcttcgcccagccggtttttgaat
gaactccccgatgagcatgtcgatatacagggagcggcgccttctttgtctgcggggcat
ggaaaccttggttttgaatcggagtatccccccgggacaagaatctatcatgaagactac
ggtacgggcgaggtgatccgtaatgtccaaaacggtggccatctcgtgatacaggttgcc
tttgagacagggcattccatgaccttccttcctgagttttcagggtatcagctggaaaag
ctcggctcctag
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