Oceanispirochaeta crateris: EXM22_11290
Help
Entry
EXM22_11290 CDS
T06177
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
ock
Oceanispirochaeta crateris
Pathway
ock03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ock00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
EXM22_11290
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ock03021
]
EXM22_11290
03400 DNA repair and recombination proteins [BR:
ock03400
]
EXM22_11290
Enzymes [BR:
ock01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
EXM22_11290
Transcription machinery [BR:
ock03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
EXM22_11290
DNA repair and recombination proteins [BR:
ock03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
EXM22_11290
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_CTD
RNA_pol_L
RNA_pol_A_bac
Motif
Other DBs
NCBI-ProteinID:
QEN08540
UniProt:
A0A5C1QNI4
LinkDB
All DBs
Position
complement(2498359..2499399)
Genome browser
AA seq
346 aa
AA seq
DB search
MARKNLLKGFKRPKGITFEHGEQESGYGKFMAYPFERGYGATIGNSLRRILLSSIQGYAI
TAVRVTSYNKDGNAHVITSEFESIPEVVEDTPELISNLKSLQLSLPEDIEEKTILVEWKG
VGEMTGADLEKDGIIVTNKDLKICTLMEDADLEFEIQIDLGRGYVPSELNEKYVDVVGTI
PVDSIFSPIRKVRYEVENTRVGQRSDYDKLILEIWTDGTISPEDALAESAKIAKDHFTIF
INFDEDDVVGDDEVDEEEERVKALLDTPVEELELSVRSSNCLKNANIKTIGDLTRRTEED
IAKTRNFGKKSLMEIKEKLKEWNLSLGMVDYSVLKKTIKLENNKEE
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atggcacgtaaaaacctattgaagggatttaaacgaccaaaaggaatcacctttgaacat
ggtgaacaagaatctggttatggaaagtttatggcttacccttttgaaagaggatatgga
gcaacaatcggtaattcattacgtcgaattttgctttcttctatccagggatatgctata
actgctgtgcgggttaccagttataataaagatggtaatgcacatgttataaccagtgaa
tttgaatcaattcctgaagtcgttgaagatacacccgaattaataagcaatttaaaatct
ctgcaattaagccttcctgaagacattgaagagaagacaattcttgttgagtggaaaggt
gttggtgaaatgacaggtgctgatcttgaaaaagatggcattattgtaaccaataaagac
cttaaaatttgtactttgatggaagatgctgatctcgagtttgaaattcaaattgatctt
ggaagaggttatgttccatctgagctgaatgagaaatatgttgatgttgtcgggactatt
cccgtcgattcaatcttttcacccatcagaaaagttcggtatgaagtagagaatacaaga
gtcggtcagagatctgactatgataagctgattcttgaaatctggactgatggcacaatt
tcacccgaagatgccttggctgagtcggctaaaatagcaaaagatcacttcacaattttt
atcaattttgatgaagatgatgtggttggagatgatgaagttgacgaagaagaggaacgg
gtaaaagctctcttggatacaccagttgaagaactggaattatcagtacgttcaagtaat
tgtctcaaaaatgcaaacatcaagacgattggtgatttgaccagaagaactgaagaggat
atagcaaaaaccaggaactttggtaaaaaatctttgatggaaatcaaagagaagctgaaa
gaatggaacctctcattaggtatggttgattatagtgttttgaagaaaacaattaaactt
gaaaataataaggaagaatag
DBGET
integrated database retrieval system
