Oceanispirochaeta crateris: EXM22_11880
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Entry
EXM22_11880 CDS
T06177
Name
(GenBank) RNB domain-containing ribonuclease
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
ock
Oceanispirochaeta crateris
Brite
KEGG Orthology (KO) [BR:
ock00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ock03016
]
EXM22_11880
Enzymes [BR:
ock01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
EXM22_11880
Transfer RNA biogenesis [BR:
ock03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
EXM22_11880
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GFIT
Motif
Pfam:
RNB
HTH_RNase_II
RNase_II_C_S1
Motif
Other DBs
NCBI-ProteinID:
QEN08651
UniProt:
A0A5C1QLX4
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Position
complement(2617957..2619783)
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AA seq
608 aa
AA seq
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MKKDSLVLYKQVPARVRELLSDKIIILLPDGKEKKVRSKDIQLLHPGPISSLPDGAAPDG
QIEEAWELLQGESPSLQELAELAFGEYSPQTAWSAFLLLNRTPWFRGSMEEIIVRTPEEV
EAIQKEESEKKAADLRWASFIESLKKGIIADDDRGFLTDLEQYCLQKSKKSRILQNLGKQ
QSPENAHRLLLQLNIWNLRRNPWPERNQIPLTTPSFALEEGPEVERLDLTHMDAFAIDDV
GNQDPDDALSFHDGMLWVHIADSSSLIPAGTEADREARGRAANLYLPETTIPMLPPEATA
RLGLGLQEISPALSFGYTLDKEYNVTDCRISFSRVRVTRMSYGEAEEKLEEEPFSSIMKV
AKRFNSWRKENGALFLQLPEVKIRVGEEGSGEIMISALEEYQSRDMVAEMMMLTGFHTAR
YARDKGIPIPYVIQPAPEGDLPETSPDDPASMVQLRRFMKRSQTTTSGGPHSGMGLPVYT
RATSPLRRYSDLMVQQQLRLHMAGLPLLSEEDILEGTASCESVTGRVTGSERSSNLHWKL
VYLAEHPDWEGEGILVGRSDKQMVLQIPSLALETRIALKEKLPLNSRLTVALERVDVPEQ
QVQFRVRD
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaagattctctagtcctttacaagcaggttcctgcccgtgttcgtgagctcctg
tctgataaaataatcatcctccttcctgacgggaaagaaaaaaaagtccgtagcaaagat
attcaactccttcatcccggtcccatctcatcccttcctgatggagccgctcctgacggg
cagatcgaagaggcctgggaattgttgcagggagaatctcccagtctccaggaactggca
gagcttgcctttggtgagtacagtccgcaaacggcctggagtgcttttcttctcttgaac
agaacaccctggttccggggaagtatggaggagattattgtcagaactcccgaggaagtg
gaagccatccaaaaagaggaaagcgaaaaaaaagcggccgatcttcgctgggcttccttc
attgaatcccttaaaaaaggaattattgccgatgatgacagaggattccttaccgatttg
gaacagtactgtcttcaaaaaagcaaaaaatccaggattctacagaatcttggaaagcag
cagtctcctgagaatgcccataggcttcttcttcagttgaatatttggaatctgcggaga
aatccctggccggaacgcaaccagatccccctgacaactccttcctttgctctggaggaa
ggaccagaggtggagcgtcttgacttgacccacatggatgcctttgccatagatgatgtt
gggaatcaggaccctgacgatgccttgagttttcatgatggcatgctctgggtccatatt
gcggattcttcctccctgattcctgccgggaccgaggcggatagagaagcccgtgggagg
gctgctaatctgtaccttcctgaaacgactattcccatgctgcctcctgaggcaacggcg
aggctggggctgggattacaggaaatctctccggctctcagcttcggttacaccctggat
aaggaatacaacgtcaccgattgccgtatcagcttttcaagagtccgagttactcgtatg
agctacggtgaagcagaagaaaaattggaggaagaacccttttccagtattatgaaggtg
gcaaaaaggttcaacagctggcgcaaagagaacggtgccctgtttctccagctgcctgaa
gtgaaaatcagggtaggagaagaaggttctggtgagattatgatttccgctttagaagag
tatcagagccgggacatggtggcagagatgatgatgctgacgggctttcatacggctagg
tatgcccgggataagggaatccccattccctatgttattcagcccgcacctgagggggat
ctccccgaaacatctcctgatgaccctgcttccatggtgcagttgaggcgattcatgaaa
aggagccaaacgacaacttcaggtggccctcacagcgggatgggtttgcccgtctataca
agagcgacaagcccactgaggcggtattccgatcttatggttcagcagcagctgcgtctg
catatggcaggtttgcccctcttgagtgaagaggatattctggagggaaccgcgtcttgt
gaatcggtgaccggccgggtcacaggaagtgaacgttcttccaatctccactggaaactt
gtttatctggcggagcatcctgactgggaaggtgaaggcattttggtggggcgttctgac
aaacagatggtcctgcaaattccctctctggccctggaaacccgtatcgccctaaaagaa
aaactgcctcttaacagtcgtttgaccgtcgctcttgagagagtggatgttcccgaacag
caggtgcagttccgggtcagggattga
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