Oceanispirochaeta crateris: EXM22_14500
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Entry
EXM22_14500 CDS
T06177
Symbol
sbcD
Name
(GenBank) exonuclease subunit SbcD
KO
K03547
DNA repair protein SbcD/Mre11
Organism
ock
Oceanispirochaeta crateris
Brite
KEGG Orthology (KO) [BR:
ock00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ock03400
]
EXM22_14500 (sbcD)
DNA repair and recombination proteins [BR:
ock03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
EXM22_14500 (sbcD)
Archaeal homologous recombinant proteins
EXM22_14500 (sbcD)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Metallophos
Metallophos_2
SbcD_C
Motif
Other DBs
NCBI-ProteinID:
QEN09131
UniProt:
A0A5C1QN74
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Position
complement(3187658..3188887)
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AA seq
409 aa
AA seq
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MKILHTSDWHLGKKLGNWSRLEEQKEILDEIIEICRIEEPDLILLSGDLYDSWNPPHEAI
ELLYRSLHRMTGGGKRIILALAGNHDAPEHVEAPDALARECGIFFMGYPESQPEDISLDS
GLSASFPDPGMVLFKGLPGVREEVRIICTPYASETRMRRYLDVENKEDALRTVLTKRWKN
LATKYFNDQGINLMAAHLFMGSRSELLAEEEPEGEKSILHPGGLEQIYTESLPGECQYMA
LGHLHRGFPVASSPVPAVYSGSPGAYSLSEKSEGKSVVLITVQPGGKAKYRFHPLQSPWP
LYRKTFSSADEAVTWLQEHPRGYVEITMKTEEYLRGAEKQKILQSHERILAIIPELKNKG
GEEIFKKRNFSGKSIREVFDEYYRSSRQNTPPGEELMNLLDEILSGQDS
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattctacacacatcagactggcacctcggaaaaaaactagggaactggtcacgc
ctggaagaacagaaagagattctggatgaaatcatagagatctgccggatagaagaaccc
gacctgattctcctttcgggagatctatatgacagttggaatccgccccacgaagccata
gaactcctctaccgcagcctccacaggatgacgggaggaggcaaaaggatcatcctggcc
ctggctggaaaccacgacgctcccgaacatgtggaggctcccgatgctctggccagggag
tgcggtattttcttcatgggatatcctgagagccaacctgaagacataagcttagattcg
ggactctctgcctcctttcccgatcctggaatggtcctcttcaagggattgccgggagtc
agggaagaagtgagaatcatctgtactccctatgccagcgaaacgaggatgagacgctac
ctcgatgtggaaaacaaagaagacgccctgagaaccgtgctgaccaagcgctggaaaaat
ctggcaacaaaatattttaatgaccagggaatcaacctgatggcagcccacctctttatg
ggcagccgctcagaacttctggcagaagaagaacccgaaggtgaaaagtccatactgcat
cccggaggtcttgagcagatttataccgaatctctccccggagaatgtcagtacatggca
ctgggccatctccacagagggtttcctgtggcaagctcccctgtcccggcggtgtattcc
ggcagtcccggagcctacagtctgagtgaaaaatcagaaggcaaatctgtggttctcatc
actgtccagcccggcggaaaagcaaagtaccgatttcatcctctacaaagtccatggccc
ttgtaccgcaaaaccttcagtagtgccgatgaggccgtaacctggcttcaggaacatcca
cggggttatgttgaaataacaatgaaaacagaagaatacctcaggggagctgaaaaacaa
aagatcctccaaagccatgagcggattcttgcgattatccccgaattgaaaaacaaagga
ggggaagaaattttcaaaaagaggaacttttccggaaagtccataagagaagtttttgat
gaatactaccgcagcagccgacaaaacacccccccgggagaggaactgatgaacctcctt
gatgaaattctcagtggacaagactcatga
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