Oceanispirochaeta crateris: EXM22_15715
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Entry
EXM22_15715 CDS
T06177
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
ock
Oceanispirochaeta crateris
Pathway
ock03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ock00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
EXM22_15715 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ock03400
]
EXM22_15715 (recD)
Enzymes [BR:
ock01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
EXM22_15715 (recD)
DNA repair and recombination proteins [BR:
ock03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
EXM22_15715 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
UvrD_C_2
AAA_11
Viral_helicase1
Helicase_RecD
SH3_13
AAA_22
UvrD-helicase
SLFN-g3_helicase
PhoH
AAA_16
nSTAND3
AAA_28
NACHT
AAA_29
AAA_18
NPHP3_N
PIF1
AAA_23
ResIII
Motif
Other DBs
NCBI-ProteinID:
QEN09353
UniProt:
A0A5C1QMZ3
LinkDB
All DBs
Position
3456810..3458759
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AA seq
649 aa
AA seq
DB search
MNRSRSKAVQRFLELKSIRENPPSGLIRRLKPRKEGERFPLAAILTGSEPLWIQSAEHMV
SRYADSRKEELRWLLLYFLELSSQGHILISSEDIRDDLPLWAGKCYARADQLYDNLSLIV
EENPRLFSALQEGESRGMSEPGERRPLLYASDFSCFYLLKKRRFEQQFLELLGNISGEEG
KIDVSPDLISGLHRAYESLCDSGDIPISEDTLKAALMVGGSRLSIITGGPGTGKTTILAG
LLRLFLEASQDSSSKLPEVRLCAPTGRAAKRMMESMENLLQNPVLQSAFSHPAETIHKVL
GLRPGSPALYDEKRTLKADLIIVDEASMVDLNLMTGLFRAMKSSARIVLVGDRDQLPSVE
SGALLSDLLFEMEKPNHRLSGRVLSLSKVHRNSGAILESSRLVIQGDGPEFLNFLKQHEG
LPVSASENSGWLRYGDLPSFKDLLSELASEFKASSLKFGGAGFRRPSREWKGIIHEIDPY
FKLYRDHIILSPTRKGLFGTASLNRGLNDVLGGNPDGDYHGQPVMVTRNDYERSLFNGDR
GVVLRFSDGLYAFFEDPEAGYRCFPLLLLEDRETSYALTIHKSQGSEYNKVHILMPDGSE
RLISREILYTGITRARLGVTLYGSEEVLLLCLSRGVRRLSGIRTFMQSS
NT seq
1950 nt
NT seq
+upstream
nt +downstream
nt
atgaatcgaagccgatccaaagcggtccaacgttttttagagttgaagtccatccgtgaa
aatcctccctccggactgataaggagattgaagccccgcaaggagggggaacggtttccc
ctggcggccattctgacaggcagtgaacccctgtggattcagagtgcggaacatatggtc
agtcgatatgctgatagccgcaaagaagagttgaggtggcttctgctgtattttctggaa
ctcagctctcaggggcatatcttgatctcttctgaggatataagggatgatttacccctt
tgggcagggaagtgctatgccagggcggatcagctgtatgataatttgagcctcatagtt
gaagagaatccccgtctcttctcagctcttcaagagggggaaagccggggtatgtcggaa
cctggggaaagaagacccctcctttatgcgagtgatttctcctgtttttacctattgaag
aaaaggcggtttgagcagcagtttctggagcttttagggaatataagtggagaagagggg
aagattgatgtctctcccgatttgatctcggggttgcatagggcctatgagtcactgtgt
gatagtggagatattcctatctctgaagacactctgaaggcggccctcatggtgggaggc
tcccgtctttctattatcacaggtggtccaggaacaggtaaaaccacgatacttgcgggg
ctcctgcgcttgtttttagaagcctctcaagattcatcatccaaacttcccgaggttcgg
ctttgtgctcccacgggccgggcagccaagaggatgatggaaagcatggagaacctattg
cagaatcctgttttacagagtgccttttcccatccagcggaaaccattcataaggttttg
ggacttaggccgggatcaccggctctctacgatgaaaagagaaccctcaaggccgatctc
attattgtggatgaagcatccatggtcgatctgaatctcatgaccggtctgtttcgggcc
atgaaaagcagtgccaggattgtcctggtgggagatcgagaccaacttccctcagtcgag
tcgggagctctcctctcggatctgctttttgaaatggaaaaaccgaatcataggctgtcc
gggagagtcctttctctttctaaggtacatagaaacagcggggcaatccttgaatcttcc
cgcctggttattcagggagatggccctgaatttctcaactttctaaaacagcatgaaggg
ctccctgtttcagcatcagagaacagtggctggctacgctatggagatcttccctctttt
aaagatctcctgagtgaattggcttccgaattcaaagcctcttccttgaaatttggagga
gcaggatttcgcagaccctcccgtgaatggaaaggcatcattcatgaaattgatccctat
tttaagctctacagagatcacatcatactcagcccgaccagaaaggggcttttcgggaca
gcatccctgaacagaggcctcaacgatgtgctgggaggaaatcccgatggtgattaccac
ggtcaaccagtgatggtgacccgcaatgattatgagcggtctttgtttaatggtgaccgg
ggggttgttttgcgtttttctgatggtctctatgccttttttgaagatcctgaggcgggg
tatcggtgttttcctcttttattgttggaagatcgggaaacttcctatgctctcaccatt
cataagagtcagggttctgaatataataaggtccatatcctcatgcccgatggctcagag
cggctcatctctcgtgagattctgtatactggtattacccgggcaaggctgggggtaacc
ctttacggcagtgaggaggttcttcttctttgtttgtccaggggggtgaggcgtttgtcg
gggataagaacatttatgcagagctcttga
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