Oceanispirochaeta crateris: EXM22_15730
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Entry
EXM22_15730 CDS
T06177
Name
(GenBank) RNA pseudouridine synthase
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
ock
Oceanispirochaeta crateris
Brite
KEGG Orthology (KO) [BR:
ock00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ock03009
]
EXM22_15730
Enzymes [BR:
ock01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
EXM22_15730
Ribosome biogenesis [BR:
ock03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
EXM22_15730
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
Gal-3-0_sulfotr
Motif
Other DBs
NCBI-ProteinID:
QEN09356
UniProt:
A0A5C1QS18
LinkDB
All DBs
Position
3459804..3460523
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AA seq
239 aa
AA seq
DB search
MLDIKDRILYEDNHLIIINKASSEIVQGDKTGDETLGEKVQKYIKIRDEKPGNVFLGVTH
RLDRPTSGLVVFAKTSKALSRMNVLFREHHLKKTYWAILEKAPRKDAAQLVDYLRRDRNK
NRSFCCNSGRDDAKKAVLSYEVLNRIGSETLVEVDLETGRHHQIRAQFSGRGCPIKGDLK
YGAKAPNSNGSIHLHARKIVFVHPVSKVEITVVAPVPRNDILWQEFEANSAREKTGADD
NT seq
720 nt
NT seq
+upstream
nt +downstream
nt
atgttggacatcaaagacaggattctctacgaagataatcacctgatcatcatcaataaa
gcctcctcagaaatcgttcagggtgataaaaccggggatgagactctgggagaaaaagta
cagaagtatataaagataagagatgagaagcctggtaatgtttttttgggggtcacacac
cggctggaccggcctacaagcggtcttgtggtctttgccaaaacatcaaaggccctttcc
cgaatgaatgtcctgttccgggaacatcatttgaaaaagacctactgggccatccttgaa
aaagcccctaggaaggatgcggctcaactggtcgattatctgagaagagatagaaataaa
aatcgctctttttgctgcaattctgggagggatgatgcaaaaaaagccgttctctcctat
gaggtgctgaaccggattgggtctgaaacacttgtagaagttgacctcgaaactggccgt
catcaccagattcgggcgcagttttccggtagaggctgccccattaaaggggatctgaaa
tatggggccaaagcacccaattccaatggaagtattcaccttcatgccaggaagatcgtt
tttgtccatcctgtttcaaaagtagagattacagtggtggctcccgtaccgagaaatgac
atcctctggcaggagtttgaagctaactcagccagggaaaagaccggtgccgatgattga
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