Oceanispirochaeta crateris: EXM22_17850
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Entry
EXM22_17850 CDS
T06177
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
ock
Oceanispirochaeta crateris
Brite
KEGG Orthology (KO) [BR:
ock00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ock03032
]
EXM22_17850
03036 Chromosome and associated proteins [BR:
ock03036
]
EXM22_17850
03400 DNA repair and recombination proteins [BR:
ock03400
]
EXM22_17850
DNA replication proteins [BR:
ock03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
EXM22_17850
Chromosome and associated proteins [BR:
ock03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
EXM22_17850
DNA repair and recombination proteins [BR:
ock03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
EXM22_17850
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HTH_5
DUF2209
DnaD_N
GntR
Sigma70_r3
CggR_N
HU-CCDC81_bac_2
MCM5_C
HTH_9
Motif
Other DBs
NCBI-ProteinID:
QEN09755
UniProt:
A0A5C1QNS4
LinkDB
All DBs
Position
complement(3947861..3948136)
Genome browser
AA seq
91 aa
AA seq
DB search
MNKQDLVRELSQNLDMSQKAVRETLDALMEEIILIMEEGEKYNQSGFGTFKAELTNERIS
YNPVLKKRMKLPVRKKVKFRPSAKLKDKINE
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaacaggacctggtcagagaactgtctcaaaacctcgatatgtctcaaaaagca
gtcagagaaacactggacgccctcatggaagagatcatcttaataatggaagagggcgaa
aaatacaaccaatccggttttgggaccttcaaggcagagttgacaaatgagcgcatcagc
tacaatcctgtcctcaaaaaacgaatgaaactacccgtcagaaagaaggtaaagttcaga
ccctcagccaaactcaaggataaaatcaatgagtaa
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