Oceanispirochaeta crateris: EXM22_17940
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Entry
EXM22_17940 CDS
T06177
Symbol
nifA
Name
(GenBank) nif-specific transcriptional activator NifA
KO
K02584
Nif-specific regulatory protein
Organism
ock
Oceanispirochaeta crateris
Pathway
ock02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
ock00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
EXM22_17940 (nifA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ock03000
]
EXM22_17940 (nifA)
Transcription factors [BR:
ock03000
]
Prokaryotic type
Helix-turn-helix
Other families
EXM22_17940 (nifA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
GAF
GAF_2
HTH_8
AAA_5
AAA
GAF_3
AAA_3
AAA_2
TIP49
bpMoxR
Mg_chelatase
nSTAND3
MCM
Motif
Other DBs
NCBI-ProteinID:
QEN09772
UniProt:
A0A5C1QUM7
LinkDB
All DBs
Position
complement(3961901..3963466)
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AA seq
521 aa
AA seq
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MSEETLNSKHYRRKIKELTLLFEISQILDQNMDLKEVITPILEPLAENIGMERGTITLLN
RKTGDISIEAAFGLSEEEKTKGRYKVGEGVTGTVVQTGVPKIIPDIEEEPSFLDRTGARK
VKNRKTSFICVPIKSGNEVIGAFSVDRIYEDSGLDLEDDVRLLTIVASMIARAVKLRQHS
EEEKQKLLEENTRLQNQLKDKFQPDNMIGNSQAMQEAFDLIAQVSKSEATVLIRGESGTG
KELVAHAIHYNSLRAKKPFIKVNCAALPESVIESELFGHEKGAFTGALATRKGRFEMADG
GTIFLDEIGELSAMTQVKLLRVLQEREIERVGGSQTIKINVRIITATNRNLEEEILKGTF
REDLYYRLNVFPIHIPPMRERKTDLMLLADFFIEKYSQKNRKQVKRISSSAIDLLMSYHW
PGNVRELENCIERAVLLSTDQVIHAYHLPPSLQSAESSDTGLHTTLLQSVENLEIELIKE
ALKSNRGNMAKAARKLDITERIMGLRVKKYGIDYRKYRTNM
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaagaaacacttaactccaagcattacagaagaaaaattaaagaactaaccctt
ttatttgaaatcagccagattctggatcagaacatggacctgaaagaggtgattaccccc
attctggaacccctcgctgaaaatattggaatggagcgcggaaccatcaccctgttaaac
agaaaaacgggagacatatccattgaggccgccttcggactctctgaagaagagaagaca
aagggccggtacaaagtgggagaaggggtcaccggtacggttgttcagacaggagttcca
aaaatcattcccgatatcgaagaagaaccctcctttctggacagaacaggggcaagaaag
gtcaagaatagaaagacctcattcatctgtgttcccatcaaaagcggaaatgaagtgatt
ggtgctttcagtgttgacagaatttatgaagattcgggattagatctggaagacgatgta
cgccttctgaccatagtggccagcatgatagccagagccgtaaaactccgtcagcattca
gaagaagaaaaacagaaacttttagaagaaaatacacgccttcagaatcaactaaaagat
aaattccaaccggataacatgattggaaactcccaggccatgcaggaagcctttgatctt
attgcccaggtttccaagagtgaagccaccgtactgatcaggggtgaaagcggtacgggt
aaagagcttgttgcccatgccatacattacaacagcctcagagctaaaaagcccttcatt
aaggtcaattgcgccgccctgcctgagagtgtcattgaaagtgaactcttcggtcatgaa
aagggggcctttacaggagccctggctacacgaaaaggccgttttgaaatggccgatggt
gggacgatctttttagatgaaattggagaactctctgccatgacccaggtcaaactcctt
agagttctgcaggaacgggaaatagagcgcgttggtggctctcagactataaaaatcaat
gtccgcatcatcacagcgaccaaccggaacctcgaagaagaaattctgaaaggaacattc
agagaagacctgtattacagactcaatgttttccccattcacattccccccatgagagaa
cgcaaaacagacctgatgcttctggccgatttctttattgaaaaatacagccagaagaat
agaaaacaggtcaaaagaatttcaagttctgccatagacttgcttatgagctatcactgg
ccggggaatgttcgagagttggaaaactgcatcgaaagagctgttctgttgagtacggac
caggtcatccatgcctaccacctcccccctagcctgcaatcggcagaatcttcagataca
gggctacatacaactctgcttcaatctgtcgaaaaccttgagattgaactcatcaaagag
gccttaaagtctaaccgcggcaatatggcaaaagccgccagaaagctggatattacagaa
aggattatgggtctcagggtcaaaaagtatggaattgattaccggaaatatagaacaaat
atgtag
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integrated database retrieval system
