Ochrobactrum sp. EEELCW01: GTN27_00130
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Entry
GTN27_00130 CDS
T07148
Symbol
rpsA
Name
(GenBank) 30S ribosomal protein S1
KO
K02945
small subunit ribosomal protein S1
Organism
ocl
Ochrobactrum sp. EEELCW01
Pathway
ocl03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
ocl00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
GTN27_00130 (rpsA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
ocl03011
]
GTN27_00130 (rpsA)
Ribosome [BR:
ocl03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
GTN27_00130 (rpsA)
Bacteria
GTN27_00130 (rpsA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1
S1_RRP5
Spt6_S1
S1_2
OB_RRP5_4th
RuvA_N
Motif
Other DBs
NCBI-ProteinID:
QTN01678
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Position
1:complement(26949..28649)
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AA seq
566 aa
AA seq
DB search
MSEFNPSLADFESLLAESFATNDLAEGYVVKGRIVAIEKDMAIIDAGLKVEGRVPLKEFG
AKGKDGTLKPGDEVEVYVERIENALGEAVLSREKARREESWVKLEQKFANGERVDGVIFN
QVKGGFTVDLDGAVAFLPRSQVDIRPIRDVTPLMHVPQPFEILKMDKRRGNIVVSRRTVL
EESRAEQRSEIVQNLEEGQVVEGVVKNITDYGAFVDLGGIDGLLHVTDMAWRRVNHPSEI
LTIGQTVKVQIIRINQETHRISLGMKQLESDPWDGIGAKYPIGKKITGTVTNITDYGAFV
EIEPGIEGLIHVSEMSWTKKNVHPGKILSTTQEVEVVVLEVDPVKRRISLGLKQTLDNPW
TTFAQKYPVGTVVEGEVKNKTEFGLFIGLDGDVDGMVHLSDLDWNRPGEQVIEEYNKGEV
VKAVVLDVDIDKERISLGIKQLSGDKVGEAAASGELRKNAVVTCEVTAVTDGGLEVRLVD
HDLESFIKRSDLSRDRDEQRPERFTVGQKLDARVIAFDKKTRKLQVSIKALEIAEEKEAV
AQYGSSDSGASLGDILGAALKKQEKN
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaattcaatccatccctcgcagacttcgagtcgctgctggcggaatcctttgca
acgaacgaccttgctgaaggttatgtcgtcaagggccgcatcgtagccattgaaaaggac
atggcgatcatcgacgccggtctgaaggtcgaaggccgcgtgccgctgaaggaattcggc
gcaaagggcaaagacggtacgctgaagccgggcgacgaagtggaagtttacgtcgagcgc
attgaaaacgctctgggcgaagctgtcctgtcgcgcgaaaaagcacgccgtgaagaaagc
tgggtcaagctcgagcagaagttcgccaatggcgagcgcgtcgatggcgtcatcttcaat
caggtcaagggtggtttcaccgtcgacctcgacggcgctgttgccttcctgccgcgttcg
caggtcgacattcgtccgatccgcgacgtcaccccgctcatgcacgtcccgcaaccgttc
gaaatcctcaagatggacaagcgtcgcggcaacatcgttgtctcgcgtcgtaccgttctt
gaagagagccgtgcggaacagcgttcggaaatcgtccagaaccttgaagaaggtcaggtc
gttgaaggcgtcgtcaagaacatcaccgattacggtgcgttcgttgacctcggcggcatc
gacggtctcctgcacgtgaccgacatggcatggcgccgcgtcaaccatccgtcggaaatc
ctcaccatcggccagacggtcaaggtgcagatcatccgcatcaaccaggaaacccatcgt
atctcgctcggcatgaagcagctcgagagcgatccttgggatggcatcggcgcgaagtac
ccgatcggcaaaaagatcaccggcaccgtcacgaacatcaccgactacggtgcgttcgtt
gaaatcgagccgggcatcgaaggcctcatccacgtttccgaaatgtcgtggaccaagaag
aatgtccatccgggcaagattctttccaccacgcaggaagtcgaagtcgttgtgctcgaa
gttgatccggtcaagcgccgtatctcgctcggcctcaagcagaccctcgacaatccgtgg
acgacctttgcccagaagtaccctgtcggtaccgttgttgaaggtgaagtcaagaacaag
accgaattcggcctgttcatcggcctcgacggcgacgttgacggcatggttcacctctcc
gacctcgactggaaccgtccgggcgaacaggtcatcgaagagtacaacaagggtgaagtc
gtcaaggctgtcgttctcgatgtcgatatcgacaaggaacgcatctcgctcggcatcaag
cagctttccggcgacaaggtcggcgaagcagcagcttccggcgaactgcgcaagaacgcc
gttgtgacctgcgaagtgaccgccgttaccgacggtggcctcgaagtccgtctcgtcgac
cacgatctcgaaagcttcatcaagcgttcggatctgtcgcgtgaccgcgacgagcagcgt
ccggaacgcttcacggtcggtcagaagcttgacgctcgcgtcatcgctttcgacaagaag
acccgcaagctgcaggtctcgatcaaggcgctcgaaatcgctgaagaaaaagaagctgtc
gctcagtacggttcgtccgactccggcgcttcgctcggcgacatcctcggtgccgctctg
aagaagcaggaaaagaactaa
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