Ochrobactrum sp. EEELCW01: GTN27_00695
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Entry
GTN27_00695 CDS
T07148
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
ocl
Ochrobactrum sp. EEELCW01
Brite
KEGG Orthology (KO) [BR:
ocl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ocl03016
]
GTN27_00695
Enzymes [BR:
ocl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
GTN27_00695
Transfer RNA biogenesis [BR:
ocl03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
GTN27_00695
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
QTN01782
LinkDB
All DBs
Position
1:complement(154586..155203)
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AA seq
205 aa
AA seq
DB search
MTIRFHKNDLPNLDNYQVDAVAIDTETLGLNPHRDRLCVVQISPGDGTADVIQIEAGQKK
APNLVKLLKDRSITKIFHFGRFDLAVLAQAFGTMPQPVFCTKIASKLTRTYTDRHGLKEL
CNELLDVSISKQQQSSDWAAETLSAAQLEYAASDVLYLHRLKAVLEQRLERDGRAKQAEA
CFKFLPTRSELDLMGWPEDDIFAHS
NT seq
618 nt
NT seq
+upstream
nt +downstream
nt
atgactatccgttttcacaagaacgatctgccgaacctcgacaactatcaggtcgatgcg
gtcgccatcgacaccgaaacgctgggcctgaacccgcatcgtgaccggctttgcgtggtg
caaatttcgcctggtgacggcacggcagacgtgattcagattgaagccggtcagaagaag
gcccccaatctggtcaagcttctgaaggatcgctcgatcaccaagatctttcattttggc
cgcttcgatctggccgtgctggcgcaggctttcggcaccatgccgcaacctgtgttctgc
accaagatcgcatcgaagctgacccgtacctatacggaccgccatggcctgaaagagctt
tgcaacgagcttctcgacgtttcgatttccaagcagcagcaatcatcggactgggcagcg
gaaacactgtcagctgcgcagctcgaatatgcggcttccgacgtgctctatctgcatcgt
ctgaaagccgtgctcgaacagcggctggaacgcgatggccgtgcgaaacaggccgaagcc
tgcttcaagttcctgccaacgcgctcggaactcgatctgatgggctggcccgaggacgac
attttcgcccattcgtga
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