Ochrobactrum sp. EEELCW01: GTN27_00715
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Entry
GTN27_00715 CDS
T07148
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
ocl
Ochrobactrum sp. EEELCW01
Brite
KEGG Orthology (KO) [BR:
ocl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ocl03032
]
GTN27_00715 (gyrB)
03400 DNA repair and recombination proteins [BR:
ocl03400
]
GTN27_00715 (gyrB)
Enzymes [BR:
ocl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
GTN27_00715 (gyrB)
DNA replication proteins [BR:
ocl03032
]
Prokaryotic type
DNA Topoisomerases
GTN27_00715 (gyrB)
DNA repair and recombination proteins [BR:
ocl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
GTN27_00715 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
GyrB_insert
GyrB_hook
HATPase_c_3
PKS_DH_N
Motif
Other DBs
NCBI-ProteinID:
QTN01786
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Position
1:complement(162240..164681)
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AA seq
813 aa
AA seq
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MSEMPEMNSEAPAEYGADSIRVLKGLDAVRKRPGMYIGDTDDGSGLHHMVYEVVDNAIDE
ALAGHATLVTVALNPDGSCTVTDNGRGIPTDIHKEEGVSAAEVIMTQLHAGGKFDQNSYK
VSGGLHGVGVSVVNALSIWLKLKIRRAGKIHEMSFTHGVADAPLVVTGDAGAETGTEVSF
LPSPDTFSMVEFDFDTLERRLRELAFLNSGVRIKLTDRRHADVVEHELHYDGGLVEFVKY
IDQSKKSLLEEPIYIRSEKDGMTVEVAMWWNDSYHEKVLCFTNNIPQRDGGTHLAGFRGA
LTRQVTGYADASGMTKKEKVTLTGDDCREGLTAVLSVKVPDPKFSSQTKDKLVSSEVRPV
VESLVNEALSTWLEEHPAGGKVVVEKVIQAAAAREAARKARDITRKSNLSVTSLPGKLAD
CQERDPAKSEIFIVEGDSAGGSAKSGRSRQNQAILPLRGKILNVERVRFDRMISSDQVGT
LITALGTSIGKDETHGFNPDKLRYHKIIIMTDADVDGAHIRTLLLTFFFRQMPELIERGH
IYIAQPPLYKVSRGKSSQYIKNEAAFEDFLIETGLEEATLEMASGEVRAGPDLRSVVEDA
RTMRQLLAGLHTRYDRRVVEQAAIAGLLHPDASRDNATAQRSADTVAKRLDMISEETERG
WEAHVTEDGGYRFERMVRGVKDIAILDMALLGSADARQIDRVASRLSEVFAEPPVLRRKD
KVETLSGPMGLLDAIFATGRKGLTLQRYKGLGEMNAEQLWETTLDPNVRSLLQVKVTDAT
DADSLFSRLMGDDVEPRREFIQENALSVANLDV
NT seq
2442 nt
NT seq
+upstream
nt +downstream
nt
atgagcgagatgcccgagatgaattccgaagcccccgccgagtatggcgcggattccatt
cgtgttctgaaaggcctggatgctgttcgcaagcgtcccggcatgtatatcggtgacacg
gatgacggctccggcctgcatcatatggtctacgaggtcgtggacaatgcgatcgacgaa
gcgctggcaggacatgccacgcttgtcaccgtcgccctcaacccggacggctcctgcacc
gtgaccgataatggtcgtggcattccgaccgacatccataaggaagaaggcgtttcagca
gccgaggtcatcatgacccagcttcacgccggtggtaagttcgaccagaactcctacaag
gtttccggtggtctgcacggagttggcgtttcggttgtgaacgcgctgtcgatctggctg
aagctgaagatccgtcgtgccggcaagattcatgagatgagctttacccatggcgtggcc
gatgccccactcgtggtaaccggtgatgccggtgcggagacgggtacggaagtcagcttc
ctgccctcgcccgataccttcagcatggtcgaattcgatttcgatacgctggagcgccgc
ctgcgcgaactcgccttcctcaattccggcgttcgcatcaagctcaccgaccgccgccat
gcggacgtggtcgagcatgagttgcactatgacggcgggcttgtggagttcgtgaaatat
atcgaccagagcaagaaatcacttctggaagagccgatttatatccgcagtgaaaaagac
ggcatgacggttgaagtcgccatgtggtggaacgattcctaccacgagaaggtgctgtgc
ttcaccaacaacatcccgcagcgcgatggcggcacgcatctggccggtttccgcggcgcg
ctgacccgtcaggtgacgggctatgccgatgcttcgggcatgaccaaaaaggaaaaggtg
acgctgaccggcgatgactgccgcgaaggcctgaccgccgttctttcggtcaaggttcct
gatccgaagttctcgtcgcagaccaaggacaagctggtttcctcggaagttcgcccggtt
gtggaaagcctcgtcaacgaagcgctttcgacatggctggaagaacatccggctggtggc
aaggtcgtggttgaaaaggtcattcaggcagccgctgcccgtgaagctgcccgcaaggcc
cgcgacatcacccgcaagagcaatctgagcgtaacgtccctgcccggcaagcttgccgac
tgtcaggagcgcgatccggccaagtctgaaatcttcatcgtcgaaggtgactcggcaggt
ggttccgcaaagagcggtcgttcgcgccagaaccaggccatcctgccgctgcgcggaaag
atcctcaatgtggaacgcgtccgcttcgaccgcatgatctcgtccgatcaggttggcacg
ctgattactgcgctcggcacatcaatcggcaaggatgaaacgcacggtttcaacccggac
aagctgcgctatcacaagatcatcatcatgaccgatgctgacgtcgacggcgcgcatatt
cgtacattgctgctaaccttcttcttccggcagatgccggaactgatcgagcgcggccat
atctatatcgcccaaccgccgctctataaggtctcgcgtggcaagtcctcgcaatacatc
aagaacgaggctgccttcgaagacttcctcattgagacaggtcttgaagaagccacgctg
gaaatggcaagcggcgaagttcgcgccgggcctgacttgcgttcggtggtggaagatgca
cgcaccatgcgtcagcttctggcgggtcttcacacgcgctatgaccgtcgcgtggtggag
caggctgccatcgcggggctcctgcatccggatgcatcaagggacaatgcaaccgcacag
cgttccgccgatactgttgcaaagcgtctcgacatgatctcggaagaaaccgaacgtggt
tgggaagcacatgtgacagaagatggcggctatcgctttgagcgcatggtgcgcggcgtg
aaggacattgccattctcgacatggcattgctcggttctgccgatgcccgtcagatcgac
cgcgtggcttcacgcttgtcagaggtctttgccgagccgcctgtgctgcgccgcaaggac
aaggtggagacactttccgggccgatgggcctgctcgacgcaatctttgcgacgggccgc
aagggcctgaccctgcagcgctacaaaggcttgggcgaaatgaacgccgaacagctttgg
gaaaccacgctcgatccgaacgtgcgttcgctgctgcaggtcaaggtgacggatgcgacc
gatgccgattcactcttttcgcgcctgatgggcgacgatgtggaaccacggcgcgagttc
attcaggaaaacgcgctgagcgttgccaatctggacgtttaa
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