Ochrobactrum sp. EEELCW01: GTN27_00845
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Entry
GTN27_00845 CDS
T07148
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
ocl
Ochrobactrum sp. EEELCW01
Brite
KEGG Orthology (KO) [BR:
ocl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ocl03032
]
GTN27_00845
03036 Chromosome and associated proteins [BR:
ocl03036
]
GTN27_00845
03400 DNA repair and recombination proteins [BR:
ocl03400
]
GTN27_00845
DNA replication proteins [BR:
ocl03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
GTN27_00845
Chromosome and associated proteins [BR:
ocl03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
GTN27_00845
DNA repair and recombination proteins [BR:
ocl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
GTN27_00845
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_1
Motif
Other DBs
NCBI-ProteinID:
QTN03981
LinkDB
All DBs
Position
1:complement(193297..193581)
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AA seq
94 aa
AA seq
DB search
MIKSELVQIIASRNPHLFQRDVENIVGAVFDEITNALAEGNRVELRGFGAFSVKNRPARS
GRNPRTGETVDVEEKWVPFFKTGKELRDRLNGAV
NT seq
285 nt
NT seq
+upstream
nt +downstream
nt
gtgatcaaatcggaactcgttcagattatcgccagccgtaatccgcatctctttcagcgc
gatgtcgaaaacatcgtgggcgcggtattcgacgagatcacaaacgctcttgccgaaggc
aatcgtgttgagctgcgcggcttcggcgccttttcggtgaagaaccgccctgctcgcagc
ggtcgcaatccgcgcaccggcgaaacggtggatgtggaagaaaagtgggttcccttcttc
aagaccggcaaggaactgcgcgaccgtctcaacggcgcagtctga
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