Ochrobactrum sp. EEELCW01: GTN27_03090
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Entry
GTN27_03090 CDS
T07148
Name
(GenBank) DUF853 family protein
KO
K06915
DNA double-strand break repair helicase HerA and related ATPase
Organism
ocl
Ochrobactrum sp. EEELCW01
Brite
KEGG Orthology (KO) [BR:
ocl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ocl03400
]
GTN27_03090
DNA repair and recombination proteins [BR:
ocl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
GTN27_03090
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HerA_C
DUF87
AAA_22
FtsK_SpoIIIE
AAA_30
ResIII
AAA_10
DUF5852
T2SSE
AAA_16
TrwB_AAD_bind
AAA
Hydrolase
AAA_19
AAA_7
TraG-D_C
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
QTN02221
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Position
1:complement(665508..667019)
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AA seq
503 aa
AA seq
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MTAEDAIFLGASRKPDDSYQQPEYLALKYGNRHGLVTGATGTGKTVTLQVLAESFSAAGV
PVFCADIKGDLSGIGAIGVQNDGLLKRAAEVKLDPYEMRAAPVIFWDIFGEQGHPVRATI
SEMGPLLLSRLMSLTEAQEGVLNIAFRLADEEGLLLLDLKDLQAILAEMAERSAELSGKY
GNVNKASVGAIQRSLLVLDQQGGSKFFGEPALKISDLMRTTTDGRGVVSVLAADKLMMSP
RLYSTFLLWLMSELFEELPEVGDPDKPRLVFFFDEAHLLFDEAPKALVDRVEQVVRLIRS
KGVGVYFVTQNPLDVPETVLAQLGNRVQHALRAYTPRETNAVKTAADTFRPNPDFNTFQA
ITNLATGEALVSTLQAKGVPSIVQRTLMRPPSSRIGPLTPEERAKIIAASPVAGQYDQVL
DRDSAFEMLARKAQNAAAAQQKTKEEEEGGGSILGDLVGTALGTGRRSGRQTVAETAMKS
VVRSVGNSLGRALVRGILGGFKR
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atgactgccgaagacgctatttttcttggcgcgagccgcaagcctgacgactcctaccag
cagccggaatatctagcgctgaaatacggcaaccggcacggtctcgtcaccggcgcgacc
ggcacgggtaaaactgtcacgctgcaggttctggccgaaagcttttcagcggctggcgtt
ccggttttctgcgccgacatcaagggcgatctttccggcattggcgcgatcggcgttcaa
aatgacggccttctcaaacgtgcagcggaagtgaagctcgatccgtacgaaatgcgcgcc
gcgcctgtgatcttctgggatattttcggcgaacagggacaccctgttcgcgccaccatt
tccgaaatggggccactcctcctgtcgcgcctgatgagcctgaccgaggcgcaggaaggt
gtgctgaacatcgccttccgcctggcggacgaagaaggcttgctgcttctggacctgaag
gacttgcaggccatcctcgccgaaatggcggagcgctcggcagaactttcgggcaagtac
ggcaatgtgaacaaggcttcggtgggtgcgatccagcgttcgcttttggtcctcgaccag
cagggcggctcgaaattcttcggggaaccagcgctcaagatttcagacctgatgcgcacc
acgaccgacgggcgcggtgtagtgagcgtgcttgctgccgacaagctgatgatgagcccg
cggctctattccactttcctgctttggctgatgtcggaactcttcgaggaactgccggaa
gtcggcgatcccgataagccgcggctcgtcttcttcttcgatgaagcccatcttctcttc
gatgaagcgccgaaggctctggtcgaccgtgtcgaacaggtggtgcgcctgatccgctcc
aagggtgtcggcgtttatttcgtgacgcagaatccgctcgatgtgccggaaaccgttctg
gcgcagctcggcaatcgcgtgcagcacgcgcttcgcgcctatacgccgcgcgaaaccaat
gccgtgaagacggcagccgatacattccgtccgaacccggatttcaacacgtttcaggcg
atcaccaatctcgccactggcgaagcactggtgtcgacgctgcaagccaagggggtgcct
tcaatcgtgcagcgcacgcttatgcgcccgccttcatcgcgtatcggcccgctgacgccg
gaagaacgcgcgaagatcatcgccgcaagcccggttgccgggcagtacgatcaggtactg
gatcgcgattccgctttcgaaatgctggcccgcaaggcgcagaatgctgcagcagcccag
caaaagaccaaggaagaggaagaaggcggcggtagtatccttggcgatctcgtcggcacc
gcacttggtactggtcgccgctccggtcgccagacggtcgcggaaacggccatgaagtcc
gttgtccgctcggtcggcaattcgcttggccgcgcacttgtgcgcggcattctcggcggc
ttcaaacggtag
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