Ochrobactrum sp. EEELCW01: GTN27_03960
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Entry
GTN27_03960 CDS
T07148
Name
(GenBank) RNA degradosome polyphosphate kinase
KO
K00937
polyphosphate kinase [EC:
2.7.4.1
]
Organism
ocl
Ochrobactrum sp. EEELCW01
Pathway
ocl00190
Oxidative phosphorylation
ocl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ocl00001
]
09100 Metabolism
09102 Energy metabolism
00190 Oxidative phosphorylation
GTN27_03960
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GTN27_03960
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ocl03019
]
GTN27_03960
Enzymes [BR:
ocl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.4 Phosphotransferases with a phosphate group as acceptor
2.7.4.1 ATP-polyphosphate phosphotransferase
GTN27_03960
Messenger RNA biogenesis [BR:
ocl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
GTN27_03960
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PP_kinase_C_1
PP_kinase_C
PP_kinase
PP_kinase_N
PLDc_2
PLDc
Motif
Other DBs
NCBI-ProteinID:
QTN02369
LinkDB
All DBs
Position
1:839339..841633
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AA seq
764 aa
AA seq
DB search
MSENSVMASETPNAIEGGTHEMTAGLAPNPTVVPDVDVAPDVHKALNGELMQSSDRFVNR
EFSWLQFNRRVLEEAANMRQPLLERLRFLSISAANLDEFFMVRIAGLAAQVRAGVAMRSA
DGRTPQEQLDFVLDEVGRLQEEQQERLRMLREELEQDSIEIVRPSALSKPEKEWLENHFL
ETIFPVLTPLSIDPAHPFPFIPNLGFSIALQLARRADNHPMTALLRIPVALKRFIQLPTD
QQNTYRFITIEDAVSLFIGRLFPGYEVRGAGTFRIIRDSDIEVEEEAEDLVRLFETALKR
RRRGQVIRIEFDGEMPEALRVFVATELGVSENRISVHEGLLALNMISEIVSIPRDDLKFV
SYNPRFPERIREHGGDCFAAIREKDIVVHHPYESFDVVVQFLRQAAADPDVLAIKQTLYR
TSNDSPIVRALVDAAEAGKSVTALVELKARFDEEANIRWARDLERAGVQVVFGFIELKTH
AKMSLVVRREDQKLRSYVHLGTGNYHPITARIYTDLSFFTSDADIARDVAHIFNFITGYA
QPAEEMKIAISPFTLRARILKHIEDEVAHVKAGRPAAIWMKMNSLVDPQIIDALYVASQA
GVQIDLVVRGICCLRPGVPGLSDNIRAKSIVGRFLEHSRIFCFGNGNDLPSDKAIVYIGS
ADMMPRNLDRRVETLVPITNATVHQQILSQIMFANIIDNQQSYQLLADGTSRRIEKEAGE
EAFNAQEYFMTNPSLSGRGKSLKSSAPRLIAHRKRAQAERKTTA
NT seq
2295 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaaaacagcgttatggcgagcgaaacccccaacgcgattgaaggcgggacacac
gaaatgacagccggactagcccccaacccaaccgtcgttcccgatgtggacgtagcccct
gacgttcacaaagctttgaacggcgaattgatgcaaagttccgaccgctttgtgaatcgc
gagttttcctggctgcaattcaaccggcgtgttctcgaagaagccgcgaatatgcggcag
cctctgcttgaacgcctgcgcttcctgtctatctccgccgccaatctcgatgaatttttt
atggtccgcattgccggtctcgccgctcaggtgcgcgccggtgtggcgatgcgcagcgcc
gatggacgcacgccgcaggaacagctcgacttcgttctggacgaagtagggcgcttgcag
gaagaacagcaggaacgcctgcgtatgctgcgcgaggaactggaacaggacagcatcgag
attgttcgcccgtcggcgctttcaaagcccgaaaaggaatggcttgaaaaccacttcctc
gaaacgattttccctgttctgacgccactctccattgatccggcgcatccgttcccgttc
attccgaacctcggcttttccatcgccctgcagcttgcgcgccgcgccgacaatcatccg
atgacggcccttctgcgtattccggtcgcgctcaagcgcttcattcagctgccgacagac
cagcaaaacacctaccgcttcatcaccatcgaggacgcggtgagcctgttcatcgggcga
ctgttccccggttacgaagtgcgcggcgccggtacgttccgcatcatccgtgacagcgat
atcgaagtggaagaagaggcggaagatctcgttcgtctcttcgagacagcactgaaacgc
cgtcgtcgcggtcaggttatccgcattgagtttgacggcgaaatgccagaagccttgcgc
gtcttcgtggcgacggaacttggcgtttcggaaaaccgcatcagcgtgcatgaaggtctt
ctggcgctcaacatgatttcggagatcgtttcgatcccgcgggatgacctcaaattcgta
tcctacaatccgcgtttcccggagcgtattcgcgagcatggcggcgattgctttgcagcg
attcgtgaaaaggacattgtggtccatcacccctatgaatcgtttgacgtggtggtgcag
ttcctgcggcaggctgcagccgacccggatgtgctggcgatcaagcagacgctgtatcgt
acctccaatgacagcccgatcgtgcgcgcattggtcgatgctgcagaagcgggcaagtcg
gtaacggcgctggtcgagctgaaggcacgcttcgatgaggaagcgaatattcgttgggca
cgcgatctggagcgcgcgggcgttcaggtggtgttcggcttcatcgaattgaaaacccac
gcgaaaatgtcgctcgtggtacgccgtgaagatcagaagctgcgctcctatgtgcatctg
ggcacgggcaactatcacccgatcacggcgcgtatctataccgacctgtcgttctttacg
tcggacgcggatattgctcgcgacgtggcgcatatcttcaatttcatcacgggctatgcc
cagcctgccgaagagatgaagatagcgatttcacctttcacacttcgcgcgcgaatcctc
aagcacatcgaggacgaggttgcgcatgtgaaggcggggcgtccggctgcgatctggatg
aagatgaactcgctggttgatccacagattattgacgcgctctacgtggcgagccaggcg
ggcgtgcagattgatctggtcgtgcgtggcatctgctgcctgcgtccgggcgttccgggg
ctttccgacaatattcgcgccaagtcgattgtcggacgttttctcgagcacagccgcatt
ttctgcttcggaaatggcaatgacctgccttccgacaaggcaatcgtctatatcggttcc
gccgacatgatgccgcgcaatcttgatcgccgcgtggagacgcttgttccgatcacaaat
gcaacagtgcatcaacaaatcctgtcgcaaatcatgtttgccaacataattgataaccaa
cagagctatcagctacttgcggacggcacctctcgccggatagaaaaagaagcaggagag
gaagctttcaacgcgcaggaatatttcatgaccaatcctagcctgtcgggtcgcggaaag
tcgctgaagtcttcggccccccgccttatcgcgcatcgcaagcgcgcgcaggcggaaaga
aaaacgactgcatga
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