Ochrobactrum sp. EEELCW01: GTN27_04030
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Entry
GTN27_04030 CDS
T07148
Name
(GenBank) aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
ocl
Ochrobactrum sp. EEELCW01
Pathway
ocl00260
Glycine, serine and threonine metabolism
ocl00460
Cyanoamino acid metabolism
ocl00630
Glyoxylate and dicarboxylate metabolism
ocl00670
One carbon pool by folate
ocl00680
Methane metabolism
ocl01100
Metabolic pathways
ocl01110
Biosynthesis of secondary metabolites
ocl01120
Microbial metabolism in diverse environments
ocl01200
Carbon metabolism
ocl01230
Biosynthesis of amino acids
ocl01240
Biosynthesis of cofactors
ocl04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
ocl00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
GTN27_04030
09102 Energy metabolism
00680 Methane metabolism
GTN27_04030
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
GTN27_04030
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
GTN27_04030
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
GTN27_04030
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
GTN27_04030
Enzymes [BR:
ocl01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
GTN27_04030
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Motif
Pfam:
SHMT
Aminotran_1_2
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
QTN02383
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Position
1:858002..859321
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AA seq
439 aa
AA seq
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MSQANAAAKNASSDVFFNASLEDIDSEIFGAIRNELGRQRHEIELIASENIVSRAVLEAQ
GSILTNKYAEGYPGKRYYGGCQYVDVVEELAIERAKKLFGAEFANVQPNSGSQMNQAVFL
ALLQPGDTFMGLDLNSGGHLTHGSPVNMSGKWFNVVSYGVRKDDHLLDMDEVTRLARENK
PKLILAGGTAYSRVWDWKRFREIADEVGAYLMVDMAHIAGLVAGGVHPSPVPHAHVCTTT
THKSLRGPRGGMILTNDADIAKKINSAVFPGLQGGPLMHVIAGKAVAFAEALKPEFKLYA
KNVVDNARALAEELKSNGLDIVSGGTDNHLMLVDLRPKNATGKRAEAALGRANITCNKNG
IPFDPEKPFVTSGVRLGTPAGTTRGFGVTEFKEIGSLIAEVLDGLKAANSDEGNAAVEQA
VKEKVMALTDRFPMYGYQG
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atgtctcaagccaacgccgccgccaagaacgcgtcgtccgacgttttcttcaatgcaagc
ctcgaggatatcgattccgagattttcggagcaatccgcaacgaactcggtcgtcagcgc
catgaaatcgagctgattgcctcggaaaacatcgtttcgcgcgctgttctcgaagcgcag
ggttccatcctcaccaacaaatatgccgaaggctatccgggcaagcgctattatggcggc
tgccagtatgtcgacgtcgtggaagaactggccatcgaacgcgccaagaagctcttcggc
gccgaatttgccaacgttcagccgaactcgggcagccagatgaaccaggccgtgttcctt
gcgcttcttcagccgggcgacacgttcatgggcctcgacctcaattcgggtggtcacctg
acccacggctcgccggtcaacatgtccggcaagtggttcaatgtcgtgtcctatggcgtt
cgcaaggacgaccatctgctcgacatggatgaagttacccgcctcgcacgcgagaacaag
ccgaagctcatcctcgcaggcggtactgcttactcgcgcgtctgggactggaagcgtttc
cgcgagatcgccgatgaagtcggtgcctatctcatggtcgatatggcgcatattgccggt
ctcgttgccggtggcgtccatccttcgccggttccgcatgcgcatgtctgcaccacgacg
acgcacaagtcgcttcgcggaccacgcggtggcatgatcctcaccaacgacgccgacatc
gccaagaagatcaattcggctgtgttcccgggtcttcagggtggtccgctgatgcacgtc
atcgccggtaaggctgttgcttttgccgaagcgctgaagccggagttcaagctttatgcc
aagaacgtcgtcgacaatgcgcgcgcgctcgccgaagaactgaagtccaatggcctcgac
atcgtctcgggtggcaccgataaccatctgatgctggtcgatctgcgtccgaagaacgca
accggcaagcgtgcagaggctgctcttggccgcgccaacatcacctgcaacaagaacggt
attccgttcgatcctgaaaagccgtttgtcacgtccggcgtccgcctcggcacgcctgct
ggcaccacgcgcggtttcggcgtaaccgagttcaaggaaattggttcgctgatcgccgaa
gtgctggatggtctgaaggctgccaattccgatgaaggcaatgccgctgtcgaacaggcc
gtgaaggaaaaggtcatggccttgaccgaccgtttcccgatgtatggctatcagggttaa
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