Ochrobactrum sp. EEELCW01: GTN27_05715
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Entry
GTN27_05715 CDS
T07148
Name
(GenBank) DNA-binding protein HU
KO
K03530
DNA-binding protein HU-beta
Organism
ocl
Ochrobactrum sp. EEELCW01
Brite
KEGG Orthology (KO) [BR:
ocl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ocl03032
]
GTN27_05715
03036 Chromosome and associated proteins [BR:
ocl03036
]
GTN27_05715
03400 DNA repair and recombination proteins [BR:
ocl03400
]
GTN27_05715
DNA replication proteins [BR:
ocl03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
GTN27_05715
Chromosome and associated proteins [BR:
ocl03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
GTN27_05715
DNA repair and recombination proteins [BR:
ocl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
GTN27_05715
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
DUF2267
HU-CCDC81_bac_2
HU-CCDC81_euk_2
SSPI
HU-CCDC81_euk_1
Motif
Other DBs
NCBI-ProteinID:
QTN02691
LinkDB
All DBs
Position
1:1189231..1189506
Genome browser
AA seq
91 aa
AA seq
DB search
MNKNELVAAVAEKGGLTKADAGTAVDAVLAAVTGALKAGEEVRLPGFGVFSVSHRAASTG
RNPSTGKEVAIPARNVPKFSAGKGLKDAVNG
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagaacgaattggttgccgcagttgcggaaaagggcggtttgacgaaggctgat
gccggtactgctgttgacgccgtactcgccgctgttaccggcgccctgaaggctggtgaa
gaagtccgtctgcctggcttcggcgttttctccgtttcgcatcgcgctgcctcgaccggc
cgtaacccatcgaccggcaaggaagttgctattccggctcgcaatgtgccgaagttctcg
gctggcaagggcctgaaggacgccgtaaacggctaa
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