Ochrobactrum sp. EEELCW01: GTN27_08340
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Entry
GTN27_08340 CDS
T07148
Name
(GenBank) tetracycline resistance MFS efflux pump
KO
K08151
MFS transporter, DHA1 family, tetracycline resistance protein
Organism
ocl
Ochrobactrum sp. EEELCW01
Brite
KEGG Orthology (KO) [BR:
ocl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ocl02000
]
GTN27_08340
01504 Antimicrobial resistance genes [BR:
ocl01504
]
GTN27_08340
Transporters [BR:
ocl02000
]
Major facilitator superfamily (MFS)
Drug transporters
Drug:H+ antiporter-1 (12 spanner) (DHA1) family [TC:
2.A.1.2
]
GTN27_08340
Antimicrobial resistance genes [BR:
ocl01504
]
Gene variants
Tetracycline resistance genes
Transporters
GTN27_08340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MFS_1
Sugar_tr
TRI12
MFS_4
OATP
Motif
Other DBs
NCBI-ProteinID:
QTN03176
LinkDB
All DBs
Position
1:complement(1736994..1738232)
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AA seq
412 aa
AA seq
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MHDPQFVRRGLLLVFMTLFLDIIGIAIIMPVLPTFLEELTGADISTAAVDGGWLLLVYAG
MQFLFAPMIGNLSDRFGRRPVLLASIFTFALDNLICALATTYWMLFVGRVLAGISGASFA
TASAYIADVSDDSNRARNFGLIGIAFGVGFALGPVLGGLLGEFGPRVPFYGAAFLSFINF
ILAYFLLPETLTRENRRTFQFARANPLGALKQMRNYPGIGWVVLVFFLFWLAHAVYPSVW
AFVGAYRYNWSEAQIGLSLGLFGIGAAFVMALVLPRVLPVLGERRTAITGVLFSCLGMIG
YAIAWEGWMVYAVIFLTALEGLADPPLRSIAAGKVPPSAQGELQGALTSVSSITTIIGPL
IFTQLFAVFTGMNAPFVFAGMPYAVGAGLVFLALVIVVARVRPTPSAKPSEV
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atgcatgatccccagtttgtacggcggggcttgttactcgtctttatgacactgttcctc
gacattatcggcattgcgatcatcatgccggttctgccgacttttctcgaagagctgacc
ggtgcggatatcagcaccgcagccgtcgatggtggctggcttttgctggtctatgccgga
atgcagttcctgttcgcgccgatgatcggcaatctgagcgaccgtttcgggcgacggccg
gtgctgctcgcctcgattttcaccttcgcgctcgacaatctgatctgtgcgctcgcaacc
acctattggatgctgtttgtcggccgtgtgctggcaggcatcagcggagcaagcttcgcg
acggcatccgcctacattgccgatgtcagcgatgacagcaatcgtgcgcgcaatttcggc
ctgatcggcattgctttcggtgtcggctttgcgcttggtccggtgctgggcggcttgctg
ggggagttcggtccgcgcgttccgttctacggagcggcgttcctgtctttcatcaacttc
atcctcgcctatttcctgttgccggagacgttgacgcgcgaaaaccggcgcaccttccag
ttcgcccgggccaatccgctgggcgcgctcaagcagatgcgaaactatcccggcatcggc
tgggtggtgctggtcttcttcctgttctggctggctcatgccgtctatccgtccgtctgg
gccttcgtcggtgcttatcgctataactggagcgaagcccagataggtctgtcgctgggg
cttttcggtatcggcgcagcgttcgtgatggcgctggttctgccaagggtcttgccggtg
cttggcgagcggcgcacagcgatcacaggcgtgctgttttcctgtcttggcatgattgga
tacgccatcgcatgggaaggttggatggtttatgccgtcatcttcctgacggcgctggaa
ggtctggccgatccgccgctgcgcagtattgcggcaggcaaggttccgccttccgcgcaa
ggcgaattgcagggtgcactgacaagcgtgtcgagcattacgaccatcatcggcccgctc
atcttcacgcagctattcgccgtgttcaccggcatgaatgcgccgttcgtcttcgctgga
atgccctatgccgtcggagccggactggtttttctggcgctggtcatcgtggtggcgcgg
gtgcgtccaacgccctcggccaagccctcagaggtttga
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