KEGG   Ochrobactrum sp. EEELCW01: GTN27_08480
Entry
GTN27_08480       CDS       T07148                                 
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
  KO
K03702  excinuclease ABC subunit B
Organism
ocl  Ochrobactrum sp. EEELCW01
Pathway
ocl03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:ocl00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    GTN27_08480 (uvrB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ocl03400]
    GTN27_08480 (uvrB)
DNA repair and recombination proteins [BR:ocl03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     GTN27_08480 (uvrB)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      GTN27_08480 (uvrB)
SSDB
Motif
Pfam: UvrB_inter UvrB_3rd UvrB Helicase_C ResIII UVR DEAD AAA_30 AAA_22 Microtub_bd Kinesin
Other DBs
NCBI-ProteinID: QTN03202
LinkDB
Position
1:1768388..1771240
AA seq 950 aa
MASSKDKHSQDSHDKAGGFGEAPHSGGFGEMPQAELSGAPLSGSIAGPIADWAKEIGDEA
AKPRAKNPKQPKKIPERSKEASRSGRGTSMGGAASAKERAAAGLNPVAGLDISLEDAAGL
NPTGATATVQALSDLIASGNPLFKNGELWTPHRPARPDKSEGGIAIEMETSFEPSGDQPT
AIRDLLEGLDNDDRTQVLLGVTGSGKTFTMAQVIQRTQRPALILAPNKTLAAQLYGEFKS
FFPNNAVEYFVSYYDYYQPEAYVPRSDTYIEKESSINEQIDRMRHSATRALLERDDVIIV
ASVSCIYGIGSVETYTAMTFEMKIGDRLDQRQLLADLVAQQYKRQDINFVRGSFRVRGDT
IELFPAHLEDRAWRISLFGDEIETITEFDPLTGQKTGDLKSVKIYANSHYVTPRPTLNQA
IKSIKEELKHRLVELNNAGRLLEAQRLDQRTTFDLEMLEATGSCAGIENYSRYLTGRNPG
EPPPTLFEYIPDNALVFIDESHVTVPQIGGMYRGDFRRKATLAEYGFRLPSCMDNRPLRF
EEWDAMRPQTIAVSATPGGWEMEEAGGVFAEQVIRPTGLIDPPVEIRPAKSQVDDVLGEI
RETAQKGYRTLVTVLTKRMAEDLTEYLHEQGVRVRYMHSDIDTLERIEIIRDLRLGAFDV
LVGINLLREGLDIPECGFVAILDADKEGFLRSETSLVQTIGRAARNVDGKVILYADNITG
SMQRAMDETSRRREKQVAYNEEHGITPASVKKNISDILGSVYERDHVRADISGFAEEGAM
MGNNLAAHLEHLEKQMRDAAADLDFEKAARLRDEIKRLRETELAIADDPLAREFEAGDAG
ASRNKGKPTGNSRFRKPALDEMGADTTRPLGKSSLFQKPSLDDMGPGTDMAKPLFRKNTL
DEMTVKRTEVPSGGDDAAIRRERAGIGSYEDPAETARKKRRPGKTGRPGR
NT seq 2853 nt   +upstreamnt  +downstreamnt
atggcttcctcaaaagacaaacactcccaggattcgcacgacaaggctggcggcttcggt
gaagcaccacattcaggtggtttcggcgaaatgcctcaggccgaactttccggtgcgccc
ctttccggctccatcgccggccccatcgccgattgggcgaaggagatcggcgacgaggct
gcgaaaccacgcgcgaaaaacccaaaacaacccaagaaaattcccgagcgcagcaaggaa
gcgtcgcgcagcgggcgcggcacatccatgggtggcgctgcatccgccaaggagcgtgca
gcggctggcctcaatccggttgccggtctcgacatcagtctggaagacgctgccggactg
aacccgaccggtgcgaccgcgacagttcaggccctgtcggacctgattgcctccggcaat
ccgctgttcaagaacggcgaactctggacgcctcaccgcccggcacgtccagataaatcc
gaaggcggcatcgccatcgagatggaaaccagtttcgaaccctctggcgaccaaccaacg
gctattcgcgatttgctggaagggctggacaacgacgaccgcacgcaggtcctgctcggt
gtcaccggttcgggcaagaccttcaccatggcgcaggtcatccagcggacgcagcgccct
gccctgatcctggcgccgaacaagactttggccgcgcagctttatggcgagttcaagagc
ttctttccgaacaacgccgtcgaatatttcgtttcctactacgattattaccagccggaa
gcctatgtgccgcgctcggacacttatatcgagaaggaatcgtccatcaacgaacagatc
gaccggatgcgccactcggccacccgcgcgctgctcgaacgcgacgatgtgattatcgtc
gcttccgtatcgtgcatctacggtatcggatcggtcgaaacctatacggccatgaccttc
gaaatgaagatcggggaccggctcgaccagcgccagctgctcgccgatctcgtggcccag
caatacaagcggcaagacatcaatttcgtgcgcggctcgtttcgcgtgcgcggcgacacg
atcgaattgttcccggctcacttggaagatcgcgcctggcgcatttcccttttcggcgat
gagatcgagaccatcaccgagttcgacccgctcaccggccagaagaccggcgatctgaaa
tcggtcaagatttatgcgaattcgcactatgtgacgccgcgtccgaccctcaatcaggcg
ataaagtcgatcaaggaagagctgaagcatcgccttgtcgaactgaacaatgccgggcgt
ctgctggaagcccagcgcctcgaccagcgcacgacattcgatctcgaaatgctggaagca
accggttcctgtgcgggtatcgaaaactattcacgctatctgacaggccgcaatcccggc
gagccgcctccgacgctgttcgaatatattccggacaatgcgctggttttcatcgacgaa
agccacgtcacggttccgcagatcggcggcatgtatcgcggcgacttccgccgcaaggca
acgcttgccgaatatggtttccgcctgccatcctgcatggacaatcgcccgcttcgtttc
gaggaatgggacgccatgcgcccgcagaccattgctgtttcggcaacgccgggcggttgg
gaaatggaagaagctggcggcgtgttcgcagaacaggtcatccgcccgaccgggctgatc
gatccgccggtcgaaatccgccctgccaagtcgcaggtcgatgatgtactcggcgaaatt
cgtgaaacggcacagaagggttaccgtacattggtcacagtgctgaccaagcgcatggcc
gaagacctgacggaatatctgcatgaacagggcgtgcgcgttcgctacatgcattccgat
atcgacacgctggaacgtatcgaaatcattcgcgatctgcgtctcggcgccttcgatgtg
ctggttggcatcaacctcctgcgcgaaggtctcgacattccggaatgcggcttcgtcgcc
attctcgatgccgacaaggaaggcttcctgcgctcggaaacctcactggttcagaccatt
ggacgtgcagcgcgtaacgttgacggcaaggtcattctctacgccgacaatattaccggc
tcgatgcagcgcgcgatggatgaaaccagccgccgccgtgagaagcaggttgcctataat
gaagagcacggcatcacgcctgcctcggtgaagaagaatatctcggacatcctcggctca
gtttacgagcgcgatcatgtccgcgcggatatttcgggctttgcggaagaaggcgcgatg
atgggcaacaatcttgccgcccatctggagcatctggaaaagcagatgcgcgacgccgct
gccgatctcgacttcgaaaaggccgcgcgcctgcgcgacgaaatcaagcggctgcgtgag
acggaactggctattgccgacgacccgctggcacgcgagtttgaggcgggcgatgcaggt
gcaagccgcaacaagggcaagcccaccggcaattcacgtttccgcaagccggcgctggat
gaaatgggcgctgataccacgcgcccgcttggcaagtcgtctttgttccagaagccatcg
cttgacgatatgggaccgggcaccgacatggcaaaaccgctcttccgcaagaacacgctt
gatgagatgacggtcaagcggaccgaagtgccaagtggcggcgacgatgcggcgatccgc
cgtgagcgcgcaggcatcgggtcttacgaggaccctgccgaaacagcgcgcaagaaacgc
cgccccggcaagacaggccgaccgggacggtga

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