Ochrobactrum sp. EEELCW01: GTN27_09595
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Entry
GTN27_09595 CDS
T07148
Symbol
dapE
Name
(GenBank) succinyl-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
ocl
Ochrobactrum sp. EEELCW01
Pathway
ocl00300
Lysine biosynthesis
ocl01100
Metabolic pathways
ocl01120
Microbial metabolism in diverse environments
ocl01230
Biosynthesis of amino acids
Module
ocl_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
ocl00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
GTN27_09595 (dapE)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ocl01002
]
GTN27_09595 (dapE)
Enzymes [BR:
ocl01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
GTN27_09595 (dapE)
Peptidases and inhibitors [BR:
ocl01002
]
Metallo peptidases
Family M20
GTN27_09595 (dapE)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Peptidase_M28
Motif
Other DBs
NCBI-ProteinID:
QTN03414
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All DBs
Position
1:2004549..2005736
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AA seq
395 aa
AA seq
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MSLAVNPADNLAALIRCASVTPAEGGALTALEAMLKPMGFSVERPVFHDEDTPDIENLYA
RKSGNGPHLMFAGHTDVVPPGNEGDWKHPPFSAAIEDGVMYGRGAVDMKGGVACFVAAVA
RHIEKHGSIKGSVSFLITGDEEGPAINGTVKLLDWAKQRGESWDASIVGEPSNPNALGDA
IKIGRRGSLSGTITVHGVQGHAAYPHLAENPVRGITTLVDSLLYPAFDQGTANFQASNLE
VTSIDVGNKATNVIANKATASFNIRFNDTWTAETLQAEIIARLEKAASDNRLRPGRETPI
KYELAWREHPSHVFLTRDEKLIGTLTDSVEAVTGKRPELSTSGGTSDARFIKDYCPVVEF
GLVGQTMHMVDERVALADLEGLTQIYERFIADFFG
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atgagcttagccgtcaatcccgccgataaccttgccgccctcatccgttgtgcatccgta
acgcctgccgagggcggtgcgctgacggcgctggaagcaatgttgaagccgatggggttt
tcggtggaacgacctgtcttccacgatgaagacacgcccgacatcgaaaacctttatgca
cgcaaatcgggcaatggcccgcatctgatgtttgcgggacataccgatgtcgtgcctccc
ggcaatgagggcgactggaaacacccgcccttttctgccgctattgaagacggcgtgatg
tacggtcgcggtgcggttgacatgaagggcggtgtcgcctgtttcgtggccgcagttgcc
cgtcacatcgaaaagcacggcagcatcaagggcagcgtttcgttcctcatcaccggcgac
gaggaaggcccggccatcaatggcacggtcaagcttctcgactgggcgaagcagcgcggc
gaaagctgggatgcatccatcgtcggagagccgagcaacccgaatgcactcggcgatgcg
atcaagatcggacggcgcggctcgctgtccggcacgatcaccgtccatggcgtgcagggc
catgccgcctatccgcatctggccgaaaacccggtacgcggcattaccacgctggtcgac
agcctgctttatccggctttcgaccaagggacggccaatttccaggccagcaatctggaa
gtgacgagcatcgacgtcggcaacaaggccaccaatgtcattgcgaacaaggcaacggcc
tcgttcaacatccgcttcaacgacacctggacggcagagaccttgcaggccgaaatcatc
gcgcgcctcgaaaaagccgccagcgacaatcgcctgcgaccaggtcgcgaaacaccgatc
aaatacgaactcgcctggcgcgagcatccgagccatgtgttcctgacccgtgacgaaaag
ctgatcggcacgttgacggattccgtcgaggccgtaacgggcaaacgcccggaactgtcg
acatcgggcggcacgtccgatgcccgtttcatcaaggattactgtccggtggtcgagttc
ggccttgtcggacagaccatgcatatggttgacgagcgcgtggcccttgccgacctcgaa
ggcctgacacagatttatgaacgcttcatcgccgatttctttgggtaa
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