Ochrobactrum sp. EEELCW01: GTN27_10275
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Entry
GTN27_10275 CDS
T07148
Symbol
ruvB
Name
(GenBank) Holliday junction branch migration DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
ocl
Ochrobactrum sp. EEELCW01
Pathway
ocl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ocl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
GTN27_10275 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ocl03400
]
GTN27_10275 (ruvB)
Enzymes [BR:
ocl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GTN27_10275 (ruvB)
DNA repair and recombination proteins [BR:
ocl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
GTN27_10275 (ruvB)
RecFOR pathway proteins
GTN27_10275 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
TIP49
Mg_chelatase
AAA_22
AAA_3
AAA_14
Rad17
AAA_16
AAA_2
nSTAND3
AAA_18
AAA_17
RNA_helicase
Bac_DnaA
AAA_33
TsaE
AAA_28
AAA_24
DUF815
NTPase_1
Sigma54_activ_2
ABC_tran
NB-ARC
IstB_IS21
AAA_7
Cytidylate_kin
NACHT
Motif
Other DBs
NCBI-ProteinID:
QTN03532
LinkDB
All DBs
Position
1:complement(2139236..2140276)
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AA seq
346 aa
AA seq
DB search
MSDRNPLIDADRRVDEDNTLRPQTLDDFVGQAAARANLKVFIEAAKVRGEALDHVLFVGP
PGLGKTTLAQIMAKELGVNFRSTSGPVIAKAGDLAALLTNLEERDVLFIDEIHRLSPAVE
EILYPAMEDFQLDLIIGEGPAARSVKIDLAKFTLVAATTRLGLLTTPLRDRFGIPTRLNF
YTVEELEYIVRRGARIMQMGISPDGALEVARRSRGTPRIAGRLLRRVRDFALVAGADVID
RKIADEALSRLEVDNRGLDQLDRRYLNIIARNFGGGPVGIETIAAGLSEPRDAIEDIIEP
YLIQQGFLQRTPRGRVLTAIAWQHLGLPAPAEIIQQSQYGLFMEDE
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaccgcaaccctctcattgatgctgacagacgcgtagacgaagacaatacgctg
cgcccgcagacgcttgacgattttgtcgggcaggcggcagcgcgcgccaatctgaaagtc
tttatcgaggccgccaaagtgcgtggcgaggcgcttgaccacgtcctgttcgttggccct
ccgggtctaggcaagacgacgctggcgcagatcatggccaaggaactgggcgtcaatttc
cgttccacatccggcccggttattgccaaggcgggtgatcttgcggctctgctgaccaat
ctggaagagcgcgacgttctgttcatcgatgaaattcatcgcctgagcccggcagtggaa
gaaatcctctatccagccatggaggatttccagctcgacttgattatcggcgaggggcct
gccgcgcgttcggtgaagatcgatcttgcgaaatttacgctggttgcggcaacgacccgt
ctcgggcttctgaccacgccgttacgggatcgcttcggcattccgacacggctcaatttc
tatacggtcgaggaactggaatatatcgtgcggcgtggtgcgcgcatcatgcagatgggt
atttcgccggatggtgcgctggaagtcgcccgccgttcacgcggcacaccacgtattgcc
ggacggttgttgcgtcgcgtgcgcgatttcgcgctggtcgccggcgccgatgtcatcgat
cgcaagatcgctgatgaggcgctgtcacgccttgaagtggacaaccgcgggctggatcag
ctcgaccggcgttacctcaatattatcgcacgcaatttcgggggcggtccggtggggatc
gaaaccattgccgccggcctgtctgagccgcgtgacgcaattgaagacattatcgaaccc
tatctgatccagcagggtttcctgcagcgcacgccacgcggccgcgttttgacggccatc
gcatggcagcatctcggattgcccgcgcctgccgaaatcatccagcagtcgcaatacggc
ctcttcatggaagacgaatga
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