Ochrobactrum sp. EEELCW01: GTN27_10580
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Entry
GTN27_10580 CDS
T07148
Name
(GenBank) RNA polymerase factor sigma-32
KO
K03089
RNA polymerase sigma-32 factor
Organism
ocl
Ochrobactrum sp. EEELCW01
Brite
KEGG Orthology (KO) [BR:
ocl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ocl03021
]
GTN27_10580
Transcription machinery [BR:
ocl03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
GTN27_10580
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
HTH_3
HTH_10
HTH_31
HTH_23
HTH_11
KORA
HTH_25
Motif
Other DBs
NCBI-ProteinID:
QTN03587
LinkDB
All DBs
Position
1:complement(2209019..2209954)
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AA seq
311 aa
AA seq
DB search
MKQSSMSSSSAVPANRMPMVARSLPATAASSQSMIRSAMSAPYLEREEERALAIRWKELK
DQEALHRITSAHMRLVISMAGRFRKFKLPMNDLIQEGYVGLLEAAARFDPEREVRFSTYA
SWWIRASMQDYILRNWSIVRGGTSSAQKALFFNLRRLRSKLAQSDDNMTKAEMYREISDQ
LGVSTSDVEIMDSRLSGPDSSLSAPVNNEESGAARRMDFLVDDHPLQDEVAESSIDMERR
NQWLNVALDTLNERELHIIRERRLDDDGVTLEALGEKLGISKERVRQIESRAMEKLKIAL
LSQHELAAYQA
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atgaagcagtcatccatgagcagttcttccgcagttccagccaatcgcatgcctatggtt
gcgcgtagcctcccagcgacagcagcctcttcccaatccatgatccgcagcgcaatgtcg
gctccctatctggagcgcgaagaggagcgagccctcgctattcgctggaaggaactgaaa
gatcaggaagcacttcaccgcataacatccgcacatatgcgactggtcatttctatggcc
gggcgcttccgcaaattcaaactgccgatgaacgatctcatccaggaaggctatgtcggc
cttcttgaagccgctgcccgttttgaccccgaacgggaagtgcgcttctcgacctatgca
tcgtggtggattcgtgcgtctatgcaggattatatcctgcgcaactggtccatcgtgcgc
ggcggaacaagttcggcgcaaaaggcgctgttcttcaatctgcgacggcttcgttcaaaa
ctggctcagtccgacgacaatatgaccaaggccgagatgtatcgcgaaatttccgatcag
ctgggcgtttcgacaagcgatgtcgagatcatggacagccgtctttcggggccggatagc
tccttgtcggcaccagtgaacaacgaggaatcgggcgcagcccgccgcatggattttctg
gttgacgaccatcccttgcaggatgaggtcgctgaaagctccatcgatatggaacgtcgc
aatcaatggctcaatgtagcgctcgatacgctgaatgagcgcgagctgcacatcatccgc
gagcgtcgccttgatgatgacggcgtgacgctcgaagcgctgggcgaaaagcttggtatt
tccaaggagcgggtgcggcagatcgaaagccgtgcgatggagaagctgaagattgccttg
ttgagccagcacgaactggctgcctatcaggcataa
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