Ochrobactrum sp. EEELCW01: GTN27_10770
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Entry
GTN27_10770 CDS
T07148
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
ocl
Ochrobactrum sp. EEELCW01
Pathway
ocl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ocl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
GTN27_10770
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ocl03400
]
GTN27_10770
Enzymes [BR:
ocl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GTN27_10770
DNA repair and recombination proteins [BR:
ocl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
GTN27_10770
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
PriA_C
DEAD
ResIII
Helicase_C
Zn_ribbon_PriA
AAA_30
Zn_ribbon_6
Zn_ribbon_FGT1_2
Zn_Ribbon_TF
AAA_22
Zn_ribbon_Com
Motif
Other DBs
NCBI-ProteinID:
QTN03620
LinkDB
All DBs
Position
1:complement(2252424..2254634)
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AA seq
736 aa
AA seq
DB search
MSKDSHDISSLFPELAPRVVPVLVPMPAERPYSYMVPEGMNVQPGSIVRVPLGPREVAGI
VCEGETDAVDARKLRAISEVFDCPPVGADMLRFMRWAADYTLSPPGMVARMVLRVPAAFD
PEPSVPGLRYSGGEPERMTEARSRVMELARDGLAWTRSGLAHAAGVSMTVVDGLKTQGIF
EEVMLPPPAVVAKPDIDYARATLSEDQQAAAEMLSEAVEADCFSVSLLDGVTGSGKTEVY
FEAVAKAIEQGKQVLILLPEIALTQQFLDRFHDRFGAKPAEWHSDLAPRTRERVWRQIAE
GTVRVVAGARSALFLPFKELGLIVVDEEHDPAYKQEDRVFYNARDMAVVRGHISGFPVVL
ASATPSIESQVNAEQGRYKRIKLYGRYAEAALPDLKTIDMRRSPPPPGRFLSPALTEAVG
RTVERGEQALLFLNRRGYAPLTLCRVCGHRFQCPQCSSWLVEHRFRGQLMCHQCGYHEPV
PEACPECGTLDHLVACGPGVERIAEEVAATFSEARIIVLSSDMAGGVKRLRLELDAIAKG
EADIVIGTQLVAKGHNFPNMTLVGVVDADLGLANGDPRAAERTFQLLNQVTGRAGRTGRK
SLGLIQTYQPDHPVMRAIVSSDAAAFYNREIEERERSTLPPFGRLAALIISADNRPDAEN
HARALRRAAPSSPEISVLGPAEAPLALVRGRHRFRILVHGTKRADIQGFIRVLLAAGPKE
KGSIRVQVDIDPQSFL
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaagattcgcacgatatttccagtctgtttccggagctcgcaccacgggtcgtt
cccgtgctcgtgcctatgcccgcggagcggccttattcatatatggttccggaagggatg
aacgtccagcccggatcgatcgtgcgtgtgccgctcggacctcgtgaggtggcggggatc
gtctgtgagggggaaaccgacgctgttgacgccagaaagctgcgggcgatttccgaagtt
ttcgactgcccgccggtgggagccgacatgctgcgcttcatgcgctgggcagctgactac
acgctttcgccgccaggcatggtggcgcgcatggtcctgcgtgtgccagctgcatttgat
cccgaaccgtcagtgccggggcttcgttattcaggcggtgagcctgagcgtatgaccgaa
gcgaggtcgcgggtgatggagcttgcccgtgacgggcttgcatggaccagatccggcctt
gcccatgcggcgggtgtctccatgacggtcgtggacgggttgaagacgcaaggtattttc
gaggaagtcatgctgccgccgccagccgtggtggcaaagcccgatatcgactatgcacgg
gccacgctttcggaagaccagcaggcggcggctgaaatgctgtcggaagctgtcgaagcc
gattgtttttcggtttcactgcttgatggcgtgaccggatcgggcaagaccgaggtttat
ttcgaagccgttgccaaggcgattgagcaaggcaagcaggtgctgattctcttgcctgag
atcgcgctgacacaacagtttctcgaccggttccacgatcgttttggggcaaagcctgcc
gaatggcattccgaccttgcaccccgcacccgggagcgcgtctggcggcagattgccgag
ggtacggtgcgggttgtggcaggggcgcggtcggcgctctttctgcccttcaaggaactg
gggctgatcgttgtcgatgaagaacatgatccggcttacaaacaggaagaccgggtcttc
tacaatgcgcgcgacatggcggtggtgcgcggccatatcagcggctttccggtggtgctg
gcatcggccacgccatccatcgagagtcaggtcaatgcggagcaggggcgctacaagcga
atcaagctttatggtcgctatgcggaagccgcactgcccgatctgaagaccatcgacatg
cgacgttctccaccaccgccgggccggtttttgtcgcccgcactgaccgaagctgttggc
aggacggtggaacgcggagagcaggcgcttttgttcctcaaccggcgcggttacgcgcct
ttgaccttgtgccgggtctgcggccaccgctttcaatgtccgcaatgttcaagctggctc
gtggaacatcgttttcgcgggcagctgatgtgtcatcagtgcggctatcatgagccggtg
ccggaggcttgtcccgaatgcggcaccctggatcatctggtcgcctgcggtccgggcgtg
gagcgcatcgcggaagaagtcgcggcaacgttcagcgaagcgcgaatcatagttctttcg
tctgatatggcaggcggcgtgaagcggctgcggctggaactcgatgctatcgcaaaaggc
gaggcggatatcgtgatcggcacgcagcttgttgccaaggggcataactttcccaacatg
acattggtgggtgtcgtggatgccgatctggggcttgccaatggcgatccccgcgcagct
gaacgcaccttccagcttctcaatcaggtgacgggacgcgccggtcgaaccggtcgcaag
agcctcggactgatccagacctaccagccggatcatccggtgatgcgggcaatcgtcagc
agcgacgcagccgcattctacaaccgtgaaatcgaggagcgcgaacgcagtactttgccg
cctttcgggcggctcgccgcgttgattatctccgcggacaaccggcccgatgccgaaaat
catgcgcgtgcgcttcgccgtgcggcaccctcatccccggagatttccgtgctcgggcct
gccgaggcaccgcttgcgctcgtgcggggaagacaccgtttccgcattctggtgcacggg
accaaacgcgccgacattcaaggatttatccgtgtcttgctcgccgccgggccgaaggaa
aaaggctcgataagggttcaggtggatattgatccgcaaagcttcttgtag
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