Ochrobactrum sp. EEELCW01: GTN27_10960
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Entry
GTN27_10960 CDS
T07148
Name
(GenBank) RNA pyrophosphohydrolase
KO
K08311
putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
Organism
ocl
Ochrobactrum sp. EEELCW01
Pathway
ocl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ocl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GTN27_10960
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ocl03019
]
GTN27_10960
Messenger RNA biogenesis [BR:
ocl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
GTN27_10960
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NUDIX
Motif
Other DBs
NCBI-ProteinID:
QTN03655
LinkDB
All DBs
Position
1:complement(2296467..2296991)
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AA seq
174 aa
AA seq
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MSKHKGPVDPESLPYRPCVGLMVLNKAGLVWAGRRIVIPGDEMDGATQLWQMPQGGIDKG
EEPLEAAIRELYEETGMKSVSLLEEASDWINYDLPPHLVGQALKGKYRGQTQKWFAYRFE
GDESEIAINPPPGGHTAEFDRWEWKPMVELPELIVPFKRKVYEEVVAAFRHLVA
NT seq
525 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaagcacaaaggtcccgtcgatcccgaaagcttgccttaccgtccctgtgtcggg
ctgatggtgctgaacaaggccggtctggtctgggctggccgtcgtatcgtcattccgggc
gatgagatggatggcgcgacccagctctggcagatgccgcagggcgggatcgacaagggc
gaggagccgctcgaggcagctatccgcgaactttacgaggaaaccggcatgaagtcggta
tcgctgctcgaagaagcgtcagactggatcaattacgatctgccgccgcatttggtcggc
caggcactcaagggcaagtatcgcggccagacgcagaagtggtttgcctatcgtttcgaa
ggcgacgagagtgaaatcgccatcaacccgccgcccggcggacacactgccgagttcgac
cgctgggaatggaagccgatggtcgagctgccggaactgatcgttcccttcaagcgcaag
gtttacgaggaagtcgtcgcggctttcaggcatctggtagcctga
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