Ochrobactrum sp. EEELCW01: GTN27_11550
Help
Entry
GTN27_11550 CDS
T07148
Name
(GenBank) succinate dehydrogenase flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
ocl
Ochrobactrum sp. EEELCW01
Pathway
ocl00020
Citrate cycle (TCA cycle)
ocl00190
Oxidative phosphorylation
ocl00650
Butanoate metabolism
ocl00720
Other carbon fixation pathways
ocl01100
Metabolic pathways
ocl01110
Biosynthesis of secondary metabolites
ocl01120
Microbial metabolism in diverse environments
ocl01200
Carbon metabolism
Module
ocl_M00009
Citrate cycle (TCA cycle, Krebs cycle)
ocl_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
ocl_M00149
Succinate dehydrogenase, prokaryotes
Brite
KEGG Orthology (KO) [BR:
ocl00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
GTN27_11550
00650 Butanoate metabolism
GTN27_11550
09102 Energy metabolism
00190 Oxidative phosphorylation
GTN27_11550
00720 Other carbon fixation pathways
GTN27_11550
Enzymes [BR:
ocl01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
GTN27_11550
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
GIDA
DAO
Pyr_redox_2
Thi4
FAD_binding_3
HI0933_like
FAD_oxidored
DUF6270
Motif
Other DBs
NCBI-ProteinID:
QTN03760
LinkDB
All DBs
Position
1:complement(2418128..2419972)
Genome browser
AA seq
614 aa
AA seq
DB search
MASAVNNAADAAVASKYTYVDHKFDVVVVGAGGAGLRATLGMAEQGLKTACITKVFPTRS
HTVAAQGGIAASLKNMGPDSWQWHMYDTVKGSDWLGDTDAMEYLAREAPAAVYELEHYGV
PFSRTEEGKIYQRPFGGHMQNFGDGPPVQRTCAAADRTGHAILHTLYGQSLKNNAQFFIE
YFALDLIMTDGVCTGVVAWNLDDGTIHRFSAKMVVLATGGYGRAYFSATSAHTCTGDGGG
MVARAGLPLQDMEFVQFHPTGIYGAGCLITEGARGEGGYLVNSEGERFMERYAPSAKDLA
SRDVVSRCMTMEIRAGRGVGKAKDHIFLHLDHLDPAVLHERLPGISESAKIFAGVDVTKE
PIPVLPTVHYNMGGIPTNYWGEVLNPTEADPDRVQPGLMAVGEAGCASVHGANRLGSNSL
IDLVVFGRAAAIRAGQVIDRKSKIPDLDVTACDKIMERFDRLRFANGSQPTAELREKMQR
TMQEDAAVFRTSESLKQGVERMEKLWHELPDIKVTDRSMIWNSDLVETLELENLMANALT
TVVSAEARQESRGAHAHEDFPDRNDAVWRKHTLSWLSPDGKVKLDYRPVHLDPLTTEEEG
GISLAKIAPKKRVY
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atggctagtgcagtaaacaacgcggccgatgctgccgtggcaagcaaatatacctatgtc
gatcacaagttcgacgtggtggtggtcggagctggcggcgcgggcttacgcgcaacgctc
ggcatggccgagcaaggcctgaagacggcttgcatcaccaaggttttcccgacccgttcg
catacggtcgcagcgcagggtggcatcgccgcttcgctcaagaatatgggcccggacagc
tggcagtggcacatgtacgataccgtcaagggatcggactggctcggcgacaccgatgcg
atggaatatctggcgcgtgaagcgcctgccgccgtctacgaactggaacactacggtgtg
cctttctcgcgtacggaagaaggcaagatctatcagcgcccgttcggcggtcacatgcag
aatttcggcgacggccctccggtccagcgcacctgtgctgctgccgaccgtaccggccac
gcgatcctgcatacgctctacggccagtcgctcaagaacaacgcgcagttcttcatcgaa
tatttcgcgctcgatctcatcatgaccgacggtgtctgcaccggcgtcgtggcgtggaac
cttgatgacggcacgatccatcgcttctcggccaagatggtggttctggcgacgggcggt
tatggccgtgcctatttctcggcaacctctgctcatacctgcaccggcgatggtggcggc
atggttgcacgtgccggcctgccactgcaggacatggaattcgtacagttccatccaact
ggcatctatggcgctggctgcctgattactgaaggcgcgcgcggtgaaggcggttatctg
gtcaattccgaaggcgagcgcttcatggagcgttatgcgccatcggccaaggatcttgcc
tcgcgtgatgttgtctcgcgctgcatgaccatggaaatccgtgctggccgtggcgtcggc
aaggccaaggatcacatcttcctgcatcttgaccatctcgatccggctgttctgcatgaa
cgcctgccgggtatttcggaatcggccaagattttcgcaggcgtcgatgtgaccaaggaa
ccgatcccggttctcccgacggttcactacaatatgggtggcattccgaccaattactgg
ggcgaagtgttgaacccgaccgaggctgatccagaccgcgtacagccgggcctgatggct
gtcggcgaagcgggctgcgcttcggtgcacggcgcaaaccgtctcggctccaactcgctg
atcgatctggtcgtgtttggccgtgcggctgcaatccgcgccgggcaggtcatcgatcgc
aagtcgaagattccggacctcgacgttaccgcctgcgacaagatcatggagcgcttcgat
cgtctgcgttttgccaacggctcccagccgaccgcagaactgcgcgagaagatgcagcgt
accatgcaggaagatgccgccgtattccgtacgtcggaatcgctcaagcaaggcgtcgag
cgcatggaaaagctctggcatgaactgccggacatcaaggttaccgaccgttcgatgatc
tggaactccgatctcgtcgaaacgcttgagctggaaaacctgatggcgaatgcgctgacg
acggttgtttccgccgaagcgcgccaggaaagccgcggtgcccatgcgcatgaggatttc
ccggatcgcaacgatgccgtgtggcgcaagcacaccctgtcctggctgtcgccggatggc
aaggtcaagcttgactaccgtcctgtccacctcgatccgttgacgacggaagaggaaggc
ggcatcagcctcgccaagattgcgccgaagaagcgcgtttactaa
DBGET
integrated database retrieval system
