Ochrobactrum sp. EEELCW01: GTN27_12490
Help
Entry
GTN27_12490 CDS
T07148
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
ocl
Ochrobactrum sp. EEELCW01
Brite
KEGG Orthology (KO) [BR:
ocl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ocl03016
]
GTN27_12490 (truB)
Enzymes [BR:
ocl01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
GTN27_12490 (truB)
Transfer RNA biogenesis [BR:
ocl03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
GTN27_12490 (truB)
Prokaryotic type
GTN27_12490 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
QTN03938
LinkDB
All DBs
Position
1:2617895..2618869
Genome browser
AA seq
324 aa
AA seq
DB search
MARRGKKKGRPISGWVIFDKPKGMGSTEAVSKIKWLFNAEKAGHAGTLDPLASGMLPIAL
GEATKTVPYVMDGTKIYRFTVSWGEERSTDDLEGVATKTSDNRPSRADVEALLPNYTGVI
SQVPPQFSAIKIDGERAYDLAREGETVEIPSREVEIDRLEIVGIPDADRTEFEVECSKGT
YVRSLARDMGRDLGCYGHISELRRIEVAPFTEEDAVTLAELEQAWPPLPPKDEDGNVVEP
APRRDFSAIDALVIDTGAALDCLPQVPLTDDQAQRVRLGNPVILRGRDAPLEADEACVTT
RGKLLAIGYIEHGQFKPKRVFTTG
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atggcaagacggggcaagaaaaaaggtcgtccgatatccggctgggttattttcgataag
ccgaaagggatgggatcgaccgaggcggtctcgaagatcaagtggctgttcaacgccgaa
aaagccggtcatgccggtacgcttgatccgcttgcttccggcatgttgcccatagcgctg
ggtgaggccaccaaaaccgtgccttatgtcatggatggaaccaagatctaccgtttcacg
gtaagctggggcgaggaacgctcaacggacgatctggaaggtgttgccaccaagacctcg
gataatcgcccgtcgcgcgccgatgtcgaggcattgctgccgaactacaccggtgtcatt
tcgcaggttccaccgcagttttccgccatcaagatcgatggcgagcgcgcttacgatctt
gcccgcgaaggcgagacggtcgagataccttcccgtgaagtcgagattgaccgtctggag
atcgttggtattccggatgctgatcgcaccgagttcgaggtcgaatgctccaagggcacc
tatgtgcgctctctcgcacgcgatatgggccgggatctcggttgctacggacacatttca
gagctgcgccgcatcgaagttgcgccgttcacggaagaagacgctgtaacactggcagaa
cttgaacaggcttggccgccgcttccgcccaaggatgaggatggcaatgtcgtcgaaccc
gctccgcgtcgcgacttttcggcgattgatgcattggtcatcgatacgggagctgctctc
gattgtctgccgcaggtgccgcttaccgacgatcaggcgcaacgcgtgcgtcttggcaat
ccggtgatcctgcgcggacgcgatgcgcctctggaagcagacgaagcctgtgtcacgaca
cgcggaaaactgctcgccatcggttacatcgagcatggacagttcaaaccgaagcgcgtt
ttcacaacgggctga
DBGET
integrated database retrieval system
