Ochrobactrum sp. EEELCW01: GTN27_12635
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Entry
GTN27_12635 CDS
T07148
Symbol
mutM
Name
(GenBank) bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
ocl
Ochrobactrum sp. EEELCW01
Pathway
ocl03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ocl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
GTN27_12635 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ocl03400
]
GTN27_12635 (mutM)
Enzymes [BR:
ocl01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
GTN27_12635 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
GTN27_12635 (mutM)
DNA repair and recombination proteins [BR:
ocl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
GTN27_12635 (mutM)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Motif
Other DBs
NCBI-ProteinID:
QTN03967
LinkDB
All DBs
Position
1:2645702..2646583
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AA seq
293 aa
AA seq
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MPELPEVETVRRGLQPVMEGATVSQVEQRRPDLRFPFPDRFVERLSGRRILALGRRAKYL
TIHLDDGLSVISHLGMSGSFRIETDDDGGTPGEFHHERSKLSAHDHVVFHLLRADGAPAR
IVYNDPRRFGFMLFAEEGTLDSHPLLASLGIEPTGNLLSGTILAELFKGRRTPLKAALLD
QRLIAGLGNIYVCEALWRSQLSPMQTAGSVAQNPAIMEQLAADIRTVIAEAIAAGGSTLK
DYIQADGALGYFQHSFSVYGREGEPCKNPACNGIVERAVQSGRSTFFCASCQQ
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaattgccagaagtcgaaacggttcgccgtggtctgcagcccgtcatggagggt
gcgaccgtcagccaagtcgaacaacgacgcccggacttgcgctttccctttcccgaccgc
tttgtcgaacggctttccggtcggcgcattttggcgcttggacgtcgcgcgaaatatctg
acgatccatctcgatgacggcctatccgtcatcagccatcttggcatgtcgggttcgttt
cgcatcgagaccgatgatgacggcggcacgcccggcgaattccatcatgagcgctccaaa
ctgagtgcgcatgaccatgtcgtgtttcatcttctgcgagccgatggcgctccggcccgt
atcgtctacaacgatccgcgtcgcttcggcttcatgctttttgcggaagaaggcacgctc
gatagccacccgctgctggcaagcctcggcatagagccgacaggcaatctgctctcgggc
accattctggccgaactcttcaaggggcgtcggacgccgctcaaggcggcgctgctcgat
cagcggctgatagctggtcttggtaatatctatgtttgcgaggcgctctggcgcagccaa
ctgtcgcccatgcagacagccgggtctgttgcgcagaatcccgcaatcatggagcaattg
gctgccgatatccgcacagttatcgcggaagccattgccgcaggcggttcaaccctcaag
gactatattcaggcagatggcgcgcttggctatttccaacactccttctccgtctatggg
cgcgagggcgagccgtgcaaaaaccctgcctgcaacggcattgtggaacgggcggttcag
tcgggacgttcgacttttttctgtgcctcctgccagcaatga
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